RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 SH2D4AQ9H788 454 aa8.06□□□□□ -1.12
CSTF3-201ENST00000323959 VTA1Q9NP79 307 aa8.06□□□□□ -1.12
CSTF3-201ENST00000323959 GREB1Q4ZG55 1949 aa8.06□□□□□ -1.12
CSTF3-201ENST00000323959 MYO10Q9HD67 2058 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 STPG1Q5TH74 334 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 PSAPL1Q6NUJ1 521 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 XRRA1Q6P2D8 792 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 NXPE3Q969Y0 559 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 SHDQ96IW2 340 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 SCNM1Q9BWG6 230 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 IFIH1Q9BYX4 1025 aaKnown RBP8.05□□□□□ -1.12
CSTF3-201ENST00000323959 ZNF214Q9UL59 606 aaPredicted RBP8.05□□□□□ -1.12
CSTF3-201ENST00000323959 CEP295Q9C0D2 2601 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 RARSP54136 660 aaKnown RBP8.05□□□□□ -1.12
CSTF3-201ENST00000323959 ABCB5Q2M3G0 1257 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 RASGRP2Q7LDG7 609 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 OTOP3Q7RTS5 596 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 TEX13BQ9BXU2 312 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 FSCN2O14926 492 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 ITGB1P05556 798 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 DCNP07585 359 aaKnown RBP8.05□□□□□ -1.12
CSTF3-201ENST00000323959 DNAJB1P25685 340 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 TRIM71Q2Q1W2 868 aaKnown RBP8.05□□□□□ -1.12
CSTF3-201ENST00000323959 DUSP28Q4G0W2 176 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 SPECC1Q5M775 1068 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 CCDC144CPQ8IYA2 1237 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 CMTR2Q8IYT2 770 aaKnown RBP8.05□□□□□ -1.12
CSTF3-201ENST00000323959 FAM133AQ8N9E0 248 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 POF1BQ8WVV4 589 aa8.05□□□□□ -1.12
CSTF3-201ENST00000323959 NOL10Q9BSC4 688 aaKnown RBP8.05□□□□□ -1.12
CSTF3-201ENST00000323959 ATP2A1O14983 1001 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 CCDC6Q16204 474 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 SNRNP48Q6IEG0 339 aaKnown RBP8.04□□□□□ -1.12
CSTF3-201ENST00000323959 RSPO2Q6UXX9 243 aaPredicted RBP8.04□□□□□ -1.12
CSTF3-201ENST00000323959 KLHL5Q96PQ7 755 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 IER2Q9BTL4 223 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 DZANK1Q9NVP4 752 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.04□□□□□ -1.12
CSTF3-201ENST00000323959 ITPR1Q14643 2758 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 NKRFO15226 690 aaKnown RBP eCLIP8.04□□□□□ -1.12
CSTF3-201ENST00000323959 GDF9O60383 454 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 SRFP11831 508 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 SP100P23497 879 aaPredicted RBP8.04□□□□□ -1.12
CSTF3-201ENST00000323959 NOVA1P51513 510 aaKnown RBP8.04□□□□□ -1.12
CSTF3-201ENST00000323959 CNGB1Q14028 1251 aaPredicted RBP8.04□□□□□ -1.12
CSTF3-201ENST00000323959 RAB3GAP1Q15042 981 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 ZNF843Q8N446 348 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 C12orf50Q8NA57 414 aaPredicted RBP8.04□□□□□ -1.12
CSTF3-201ENST00000323959 CTAGE1Q96RT6 745 aa8.04□□□□□ -1.12
CSTF3-201ENST00000323959 MYO18BQ8IUG5 2567 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 LOC102724159A0A0B4J2E5 919 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 USP17L12C9JPN9 530 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 USP17L21D6R901 530 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 IGSF3O75054 1194 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 CSRP1P21291 193 aaKnown RBP8.03□□□□□ -1.12
CSTF3-201ENST00000323959 STARD6P59095 220 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 PWP2Q15269 919 aaKnown RBP8.03□□□□□ -1.12
CSTF3-201ENST00000323959 ZNF513Q8N8E2 541 aaPredicted RBP8.03□□□□□ -1.12
CSTF3-201ENST00000323959 CHST13Q8NET6 341 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 DBF4BQ8NFT6 615 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 MYL10Q9BUA6 226 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 ARHGEF3Q9NR81 526 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 IGF2RP11717 2491 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 TENM4Q6N022 2769 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 F5H6K3 240 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 VWA5AO00534 786 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 CAND2O75155 1236 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 CNR2P34972 360 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 RBM23Q86U06 439 aaKnown RBP8.03□□□□□ -1.12
CSTF3-201ENST00000323959 WHAMMQ8TF30 809 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 ZNF689Q96CS4 500 aaPredicted RBP8.03□□□□□ -1.12
CSTF3-201ENST00000323959 PPP1R9AQ9ULJ8 1098 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 HCFC2Q9Y5Z7 792 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 NAV1Q8NEY1 1877 aa8.03□□□□□ -1.12
CSTF3-201ENST00000323959 MECOMQ03112 1051 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 CERKLQ49MI3 558 aaPredicted RBP8.02□□□□□ -1.13
CSTF3-201ENST00000323959 TAPT1Q6NXT6 567 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 DNAAF4Q8WXU2 420 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 FLT1P17948 1338 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 TICRRQ7Z2Z1 1910 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.02□□□□□ -1.13
CSTF3-201ENST00000323959 BTG3Q14201 252 aaPredicted RBP8.02□□□□□ -1.13
CSTF3-201ENST00000323959 MBTPS1Q14703 1052 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 PPP2R5DQ14738 602 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 LOXL4Q96JB6 756 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 SLC2A4RGQ9NR83 387 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 SRPK3Q9UPE1 567 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 PLXNA4Q9HCM2 1894 aa8.02□□□□□ -1.13
CSTF3-201ENST00000323959 RBM47A0AV96 593 aaKnown RBP8.01□□□□□ -1.13
CSTF3-201ENST00000323959 CAPN9O14815 690 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 CEACAM1P13688 526 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.01□□□□□ -1.13
CSTF3-201ENST00000323959 MORC4Q8TE76 937 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 CA14Q9ULX7 337 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 LAS1LQ9Y4W2 734 aaKnown RBP8.01□□□□□ -1.13
CSTF3-201ENST00000323959 SPEGQ15772 3267 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 UPP2O95045 317 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 WISP1O95388 367 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 BAG3O95817 575 aa8.01□□□□□ -1.13
CSTF3-201ENST00000323959 ZNF806P0C7X5 589 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms