RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SMCR8Q8TEV9 937 aaPredicted RBP11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 ZNF653Q96CK0 615 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 FAN1Q9Y2M0 1017 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 WDR19Q8NEZ3 1342 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 POLR1AO95602 1720 aaPredicted RBP11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 LIG3P49916 1009 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 SNCBQ16143 134 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 PDZD4Q76G19 769 aaPredicted RBP11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 BRIP1Q9BX63 1249 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 KMT5AQ9NQR1 393 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 DISC1Q9NRI5 854 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 PLA2G4BP0C869 781 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 SEPT6Q14141 434 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 KRT31Q15323 416 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 SUSD4Q5VX71 490 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 TTBK2Q6IQ55 1244 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 SPICE1Q8N0Z3 855 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 NUF2Q9BZD4 464 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 WDR11Q9BZH6 1224 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 RNF14Q9UBS8 474 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 GFPT2O94808 682 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 GDF11O95390 407 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 GARSP41250 739 aaKnown RBP11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 CNKSR1Q969H4 720 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 NACC1Q96RE7 527 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 ADPGKQ9BRR6 497 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 EMILIN3Q9NT22 766 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 CPSF2Q9P2I0 782 aaKnown RBP11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 SGK1O00141 431 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 CLCN6P51797 869 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 USP17L2Q6R6M4 530 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 CYB5R4Q7L1T6 521 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 FAM81BQ96LP2 452 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 SLC5A4Q9NY91 659 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 PNMA6FA0A0J9YX94 578 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 SLC8A1P32418 973 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 FKBP3Q00688 224 aaKnown RBP11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 TOGARAM2Q6ZUX3 1019 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 MAGOHBQ96A72 148 aaKnown RBP11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 ANKRD36BP1Q96IX9 119 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 PCIF1Q9H4Z3 704 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 JRKLQ9Y4A0 524 aa11.87□□□□□ -0.51
SNRNP200-201ENST00000323853 PPP2R5AQ15172 486 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 CEP152O94986 1710 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 SERPINB2P05120 415 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 IL9RQ01113 521 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 MAP3K21Q5TCX8 1036 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 KANSL2Q9H9L4 492 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 SUGCTQ9HAC7 445 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 DAAM1Q9Y4D1 1078 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 ARHGAP42A6NI28 874 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 HNRNPDLO14979 420 aaKnown RBP11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 ECEL1O95672 775 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 CXCR5P32302 372 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 IRX4P78413 519 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 CUL4BQ13620 913 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 PSMD6Q15008 389 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 TAB3Q8N5C8 712 aaPredicted RBP11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 MIPOL1Q8TD10 442 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 PIGBQ92521 554 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 STRBPQ96SI9 672 aaKnown RBP11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 HESX1Q9UBX0 185 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 CAPN9O14815 690 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 CEP120Q8N960 986 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 CCDC197Q8NCU1 140 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 ATP6V0A1Q93050 837 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 SCYL1Q96KG9 808 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 TACO1Q9BSH4 297 aaKnown RBP11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 UBE2TQ9NPD8 197 aaPredicted RBP11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 CDC25AP30304 524 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 CDK8P49336 464 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 USP14P54578 494 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 LRRC63Q05C16 580 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 SNX1Q13596 522 aa11.86□□□□□ -0.51
SNRNP200-201ENST00000323853 E9PCH4 1651 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 A6NJR5 290 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 H7C0C1 242 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 BMP3P12645 472 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 ABCD1P33897 745 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 ATP5OP48047 213 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 STAT2P52630 851 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 CDC37Q16543 378 aaPredicted RBP11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 NXNQ6DKJ4 435 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 PPP1R2P3Q6NXS1 205 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 SGO2Q562F6 1265 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 ZNF579Q8NAF0 562 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 ALDH8A1Q9H2A2 487 aaPredicted RBP11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 INTS9Q9NV88 658 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 CLRN2A0PK11 232 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 ATP1A3P13637 1013 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms