RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 RANBP17Q9H2T7 1088 aaKnown RBP10.19□□□□□ -0.78
CD46-202ENST00000322918 TMX1Q9H3N1 280 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 ELP3Q9H9T3 547 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 MYH7BA7E2Y1 1941 aa10.19□□□□□ -0.78
CD46-202ENST00000322918 EML1O00423 815 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 N4BP3O15049 544 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 SFPQP23246 707 aaKnown RBP eCLIP10.18□□□□□ -0.78
CD46-202ENST00000322918 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
CD46-202ENST00000322918 BACE1P56817 501 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 AP3B2Q13367 1082 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 SPATA1Q5VX52 437 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 ARMCX5Q6P1M9 558 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 APOBEC3FQ8IUX4 373 aaKnown RBP10.18□□□□□ -0.78
CD46-202ENST00000322918 PLCD3Q8N3E9 789 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 ZNF536O15090 1300 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 TESPA1A2RU30 521 aaPredicted RBP10.18□□□□□ -0.78
CD46-202ENST00000322918 NKRFO15226 690 aaKnown RBP eCLIP10.18□□□□□ -0.78
CD46-202ENST00000322918 KLRC4O43908 158 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 SREBF1P36956 1147 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 USP11P51784 963 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 LRCH2Q5VUJ6 765 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 SNRNP48Q6IEG0 339 aaKnown RBP10.18□□□□□ -0.78
CD46-202ENST00000322918 FAM160B2Q86V87 743 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 GPBP1Q86WP2 473 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 CATSPER3Q86XQ3 398 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 FAM177A1Q8N128 213 aaPredicted RBP10.18□□□□□ -0.78
CD46-202ENST00000322918 PDCL2Q8N4E4 241 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 TRERF1Q96PN7 1200 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 TAAR1Q96RJ0 339 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 WDR11Q9BZH6 1224 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 RMND1Q9NWS8 449 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 LTBP3Q9NS15 1303 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 WDR46O15213 610 aaKnown RBP10.18□□□□□ -0.78
CD46-202ENST00000322918 RPS6P62753 249 aaKnown RBP10.18□□□□□ -0.78
CD46-202ENST00000322918 AMPD3Q01432 767 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 VGLL4Q14135 290 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 WDR78Q5VTH9 848 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 GADL1Q6ZQY3 521 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.18□□□□□ -0.78
CD46-202ENST00000322918 ZNF526Q8TF50 670 aaPredicted RBP10.18□□□□□ -0.78
CD46-202ENST00000322918 RAD54LQ92698 747 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 LENG9Q96B70 501 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 KLRG1Q96E93 195 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 PYM1Q9BRP8 204 aaKnown RBP10.18□□□□□ -0.78
CD46-202ENST00000322918 PAGR1Q9BTK6 254 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 FGFBP2Q9BYJ0 223 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 KIAA1683Q9H0B3 1180 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 GLT8D2Q9H1C3 349 aa10.18□□□□□ -0.78
CD46-202ENST00000322918 GAS7O60861 476 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 FOSP01100 380 aaPredicted RBP10.17□□□□□ -0.78
CD46-202ENST00000322918 GCFC2P16383 781 aaKnown RBP10.17□□□□□ -0.78
CD46-202ENST00000322918 GTF2F1P35269 517 aaKnown RBP eCLIP10.17□□□□□ -0.78
CD46-202ENST00000322918 BANK1Q8NDB2 785 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 ETNPPLQ8TBG4 499 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 CCDC47Q96A33 483 aaKnown RBP10.17□□□□□ -0.78
CD46-202ENST00000322918 ZNF577Q9BSK1 485 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 BHMT2Q9H2M3 363 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 POLR2AP24928 1970 aaKnown RBP10.17□□□□□ -0.78
CD46-202ENST00000322918 PSMA7O14818 248 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 ZBED4O75132 1171 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 ICAM1P05362 532 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 PLA2G4BP0C869 781 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 POTEJP0CG39 1038 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 ERCC5P28715 1186 aaPredicted RBP10.17□□□□□ -0.78
CD46-202ENST00000322918 STIM1Q13586 685 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 HERC4Q5GLZ8 1057 aaPredicted RBP10.17□□□□□ -0.78
CD46-202ENST00000322918 CEP135Q66GS9 1140 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 ZNF771Q7L3S4 317 aaPredicted RBP10.17□□□□□ -0.78
CD46-202ENST00000322918 CSGALNACT2Q8N6G5 542 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 KIAA1524Q8TCG1 905 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 KCNMB3Q9NPA1 279 aa10.17□□□□□ -0.78
CD46-202ENST00000322918 GREB1LQ9C091 1923 aaPredicted RBP10.17□□□□□ -0.78
CD46-202ENST00000322918 KCNJ18B7U540 433 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 CBFA2T2O43439 604 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 TPM3P06753 285 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 MAPK8IP2Q13387 824 aaPredicted RBP10.16□□□□□ -0.78
CD46-202ENST00000322918 BAATQ14032 418 aaPredicted RBP10.16□□□□□ -0.78
CD46-202ENST00000322918 KCNJ12Q14500 433 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 PDIA5Q14554 519 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 KRT31Q15323 416 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 ANKRD40Q6AI12 368 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 DPY19L2Q6NUT2 758 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 ILDR2Q71H61 639 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 KIAA0895Q8NCT3 520 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 IPO4Q8TEX9 1081 aaKnown RBP10.16□□□□□ -0.78
CD46-202ENST00000322918 PCMTD1Q96MG8 357 aaPredicted RBP10.16□□□□□ -0.78
CD46-202ENST00000322918 TMOD4Q9NZQ9 345 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 PPP1R9AQ9ULJ8 1098 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 TMEM150BA6NC51 233 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 RSPH10B2B2RC85 870 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 VWA5AO00534 786 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 USP2O75604 605 aaPredicted RBP10.16□□□□□ -0.78
CD46-202ENST00000322918 RSPH10BP0C881 870 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 ZNF18P17022 549 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 SUPT20HL1Q3ZLR7 823 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 TREML2Q5T2D2 321 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 SLFN12Q8IYM2 578 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 ADSSL1Q8N142 457 aa10.16□□□□□ -0.78
CD46-202ENST00000322918 NOC3LQ8WTT2 800 aaKnown RBP10.16□□□□□ -0.78
CD46-202ENST00000322918 LPAR1Q92633 364 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms