RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 TC2NQ8N9U0 490 aa18.96■□□□□ 0.63
SSR4-201ENST00000320857 KIAA0895Q8NCT3 520 aa18.96■□□□□ 0.63
SSR4-201ENST00000320857 BAG1Q99933 345 aaPredicted RBP18.96■□□□□ 0.63
SSR4-201ENST00000320857 ZC3H4Q9UPT8 1303 aaKnown RBP18.96■□□□□ 0.63
SSR4-201ENST00000320857 DOCK1Q14185 1865 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 USP27XA6NNY8 438 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 MSH4O15457 936 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 STX10O60499 249 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 PLA2G4BP0C869 781 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 IDEP14735 1019 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 INPP5BP32019 993 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 STAT3P40763 770 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 EPS15P42566 896 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 HIRAP54198 1017 aaPredicted RBP18.95■□□□□ 0.62
SSR4-201ENST00000320857 USP14P54578 494 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 SPIRE1Q08AE8 756 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 NCAPH2Q6IBW4 605 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 IRF2BP1Q8IU81 584 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 CREBRFQ8IUR6 639 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 PANX2Q96RD6 677 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 VPS16Q9H269 839 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 SLC39A2Q9NP94 309 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 TRMT1Q9NXH9 659 aaKnown RBP18.95■□□□□ 0.62
SSR4-201ENST00000320857 PNMA2Q9UL42 364 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 CCPG1Q9ULG6 757 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 RABGAP1Q9Y3P9 1069 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 UQCRHLA0A096LP55 91 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 POTEB3A0JP26 581 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 POTECB2RU33 542 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 UQCRHP07919 91 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 GOLGA8FQ08AF8 430 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 GOLGA8DPQ0D2H9 430 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 TRIM14Q14142 442 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 POTEBQ6S5H4 581 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 NYAP1Q6ZVC0 841 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 GUF1Q8N442 669 aaKnown RBP18.95■□□□□ 0.62
SSR4-201ENST00000320857 MYRIPQ8NFW9 859 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 TBC1D5Q92609 795 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 UIMC1Q96RL1 719 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 DUSP9Q99956 384 aaKnown RBP18.95■□□□□ 0.62
SSR4-201ENST00000320857 GGA3Q9NZ52 723 aa18.95■□□□□ 0.62
SSR4-201ENST00000320857 MED24O75448 989 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 FGFR1OPO95684 399 aaKnown RBP18.94■□□□□ 0.62
SSR4-201ENST00000320857 SSBP05455 408 aaKnown RBP eCLIP18.94■□□□□ 0.62
SSR4-201ENST00000320857 RPA1P27694 616 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 ADKP55263 362 aaKnown RBP18.94■□□□□ 0.62
SSR4-201ENST00000320857 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 ANKRD40Q6AI12 368 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 CCDC65Q8IXS2 484 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 SCYL3Q8IZE3 742 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 KCTD17Q8N5Z5 321 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 DNAJC19Q96DA6 116 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 CCDC51Q96ER9 411 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 AS3MTQ9HBK9 375 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 PAXBP1Q9Y5B6 917 aa18.94■□□□□ 0.62
SSR4-201ENST00000320857 IGLV3-22A0A075B6J6 115 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 E9PMD0 336 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 TUBB4AP04350 444 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 YY1P25490 414 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 EHHADHQ08426 723 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 RBL2Q08999 1139 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 CENPPQ6IPU0 288 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 FOXR2Q6PJQ5 311 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 MCF2L2Q86YR7 1114 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 TMEM139Q8IV31 216 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 CNGA4Q8IV77 575 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 PPP1R13BQ96KQ4 1090 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 NAA15Q9BXJ9 866 aaKnown RBP18.93■□□□□ 0.62
SSR4-201ENST00000320857 PANK4Q9NVE7 773 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 VAV3Q9UKW4 847 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 DNM3Q9UQ16 869 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 PITPNM2Q9BZ72 1349 aa18.93■□□□□ 0.62
SSR4-201ENST00000320857 LGALS16A8MUM7 142 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 ZSCAN12O43309 604 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 UBXN1Q04323 297 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 COASYQ13057 564 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 GPBP1Q86WP2 473 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 CATSPER3Q86XQ3 398 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 HPS3Q969F9 1004 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 POLR3CQ9BUI4 534 aaPredicted RBP18.92■□□□□ 0.62
SSR4-201ENST00000320857 WDR18Q9BV38 432 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 TANGO6Q9C0B7 1094 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 ZNF536O15090 1300 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 FDX1P10109 184 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 HSD17B4P51659 736 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 SETQ01105 290 aaPredicted RBP18.92■□□□□ 0.62
SSR4-201ENST00000320857 LRRC63Q05C16 580 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 SAMD3Q8N6K7 520 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 CYP2W1Q8TAV3 490 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 AGBL1Q96MI9 1066 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 TSG101Q99816 390 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 SEMA6BQ9H3T3 888 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 RRAGCQ9HB90 399 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 PICK1Q9NRD5 415 aa18.92■□□□□ 0.62
SSR4-201ENST00000320857 CTDP1Q9Y5B0 961 aaPredicted RBP18.92■□□□□ 0.62
SSR4-201ENST00000320857 SMCHD1A6NHR9 2005 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 A0A1W2PQC6 194 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 POTEFA5A3E0 1075 aa18.91■□□□□ 0.62
SSR4-201ENST00000320857 KRT18P05783 430 aaKnown RBP18.91■□□□□ 0.62
SSR4-201ENST00000320857 POTEIP0CG38 1075 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms