RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
FARP1-201ENST00000319562 AK8Q96MA6 479 aa13.12□□□□□ -0.31
FARP1-201ENST00000319562 POLR2MP0CAP2 368 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 ZBTB41Q5SVQ8 909 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 KIF17Q9P2E2 1029 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 CASP14P31944 242 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 FAM26FQ5R3K3 315 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 KRT39Q6A163 491 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 COG4Q9H9E3 785 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 AS3MTQ9HBK9 375 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 TAB3Q8N5C8 712 aaPredicted RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 CCNYQ8ND76 341 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 NR1H4Q96RI1 486 aaPredicted RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 STX18Q9P2W9 335 aaKnown RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 MYL1P05976 194 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 NAF1Q96HR8 494 aaKnown RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 UIMC1Q96RL1 719 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 BASP1P80723 227 aaKnown RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 YWHAHQ04917 246 aaPredicted RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 C2orf54Q08AI8 447 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 E2F4Q16254 413 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 LRRC8BQ6P9F7 803 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 EMBQ6PCB8 327 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 RNF169Q8NCN4 708 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 PITPNM3Q9BZ71 974 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 KIF1CO43896 1103 aaKnown RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 GAP43P17677 238 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 TSPYL6Q8N831 410 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 ICA1LQ8NDH6 482 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 DYDC2Q96IM9 177 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 ENC1O14682 589 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 AFPP02771 609 aaKnown RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 PODNQ7Z5L7 613 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 PYROXD1Q8WU10 500 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 SYNJ2BP-COX16A0A087WUM0 186 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 PPARAQ07869 468 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 CACTINQ8WUQ7 758 aaKnown RBP13.11□□□□□ -0.31
FARP1-201ENST00000319562 TRPV6Q9H1D0 765 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 COX16Q9P0S2 106 aa13.11□□□□□ -0.31
FARP1-201ENST00000319562 PODXLO00592 558 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 HLA-DPA1P20036 260 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 NFKBIAP25963 317 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 MRPL28Q13084 256 aaKnown RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 EXOC8Q8IYI6 725 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 SKOR1P84550 965 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 NR1H3Q13133 447 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 FAM160B1Q5W0V3 765 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 ZNF212Q9UDV6 495 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 TAF1BQ53T94 588 aaPredicted RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 RSRC2Q7L4I2 434 aaKnown RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 TGFBRAP1Q8WUH2 860 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 APOBEC2Q9Y235 224 aaKnown RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 YTHDC2Q9H6S0 1430 aaKnown RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 DR1Q01658 176 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 TFDP1Q14186 410 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 ACAD11Q709F0 780 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 SYMPKQ92797 1274 aaKnown RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 NCLNQ969V3 563 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 KDM1AO60341 852 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 ANO5Q75V66 913 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 hCG_1642624A0A1W2PR95 340 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 PTGDRQ13258 359 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 ANGPTL8Q6UXH0 198 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 KIAA2013Q8IYS2 634 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 CALR3Q96L12 384 aaKnown RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 SEC31AO94979 1220 aaKnown RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 GRIN1Q05586 938 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 PDIK1LQ8N165 341 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 SCG2P13521 617 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 MRPS15P82914 257 aaKnown RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 AK9Q5TCS8 1911 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 IKBKBO14920 756 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 SLFN14P0C7P3 912 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 RYBPQ8N488 228 aaPredicted RBP13.1□□□□□ -0.31
FARP1-201ENST00000319562 CFAP36Q96G28 342 aa13.1□□□□□ -0.31
FARP1-201ENST00000319562 KIF24Q5T7B8 1368 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 PFKFB2O60825 505 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 DDAH1O94760 285 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 CA4P22748 312 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 MORF4L2Q15014 288 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 KRT1P04264 644 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 MAN2A1Q16706 1144 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 DONSONQ9NYP3 566 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
FARP1-201ENST00000319562 STRIP2Q9ULQ0 834 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 DNMBPQ6XZF7 1577 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 PPP1R12AO14974 1030 aaPredicted RBP13.09□□□□□ -0.31
FARP1-201ENST00000319562 RWDD2BP57060 319 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 IGBP1P78318 339 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
FARP1-201ENST00000319562 IRAK4Q9NWZ3 460 aa13.09□□□□□ -0.31
FARP1-201ENST00000319562 FAM170AA1A519 330 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms