RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 NEK9Q8TD19 979 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 ZC3H15Q8WU90 426 aaKnown RBP8.04□□□□□ -1.12
NPHP1-201ENST00000316534 BLZF1Q9H2G9 400 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 AS3MTQ9HBK9 375 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 ADARB2Q9NS39 739 aaKnown RBP8.04□□□□□ -1.12
NPHP1-201ENST00000316534 PCDHA12Q9UN75 941 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 BCS1LQ9Y276 419 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 POTEMA6NI47 508 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 GCOM1H8Y6P7 765 aaPredicted RBP8.04□□□□□ -1.12
NPHP1-201ENST00000316534 TUBB4AP04350 444 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 POLR2MP0CAP2 368 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 MSNP26038 577 aaKnown RBP8.04□□□□□ -1.12
NPHP1-201ENST00000316534 CDC25AP30304 524 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 DSG3P32926 999 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 ZNF662Q6ZS27 426 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 SV2BQ7L1I2 683 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 KCTD10Q9H3F6 313 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 SEMA6BQ9H3T3 888 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 VEZTQ9HBM0 779 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 SPON1Q9HCB6 807 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.04□□□□□ -1.12
NPHP1-201ENST00000316534 UBE4BO95155 1302 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 VWA5AO00534 786 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 CYP11B2P19099 503 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 TXKP42681 527 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 UBASH3AP57075 661 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 MIIPQ5JXC2 388 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 DPY19L2P1Q6NXN4 242 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 LRRC55Q6ZSA7 311 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 CATSPER3Q86XQ3 398 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 MCF2L2Q86YR7 1114 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 ZNF280CQ8ND82 737 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 NELFBQ8WX92 580 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 CCDC51Q96ER9 411 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 FIZ1Q96SL8 496 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 MXRA8Q9BRK3 442 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 ZNF214Q9UL59 606 aaPredicted RBP8.04□□□□□ -1.12
NPHP1-201ENST00000316534 GDAQ9Y2T3 454 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 SNCAIPQ9Y6H5 919 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 RASSF10A6NK89 507 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 LMOD1P29536 600 aaPredicted RBP8.03□□□□□ -1.12
NPHP1-201ENST00000316534 LRRC63Q05C16 580 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 STK4Q13043 487 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 KRT79Q5XKE5 535 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 SPECC1LQ69YQ0 1117 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.03□□□□□ -1.12
NPHP1-201ENST00000316534 MIGA2Q7L4E1 593 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 P2RX5Q93086 422 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 KCNH4Q9UQ05 1017 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 A0A1W2PQJ5 194 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 KRT31Q15323 416 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 IQCDQ96DY2 449 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 EHMT1Q9H9B1 1298 aa8.03□□□□□ -1.12
NPHP1-201ENST00000316534 EYA4O95677 639 aa8.02□□□□□ -1.12
NPHP1-201ENST00000316534 ANGEL2Q5VTE6 544 aaKnown RBP8.02□□□□□ -1.12
NPHP1-201ENST00000316534 E4F1Q66K89 784 aaPredicted RBP8.02□□□□□ -1.12
NPHP1-201ENST00000316534 HAUS3Q68CZ6 603 aa8.02□□□□□ -1.12
NPHP1-201ENST00000316534 NAA15Q9BXJ9 866 aaKnown RBP8.02□□□□□ -1.12
NPHP1-201ENST00000316534 JADE2Q9NQC1 790 aa8.02□□□□□ -1.12
NPHP1-201ENST00000316534 OLFML3Q9NRN5 406 aa8.02□□□□□ -1.12
NPHP1-201ENST00000316534 CTNND2Q9UQB3 1225 aa8.02□□□□□ -1.12
NPHP1-201ENST00000316534 ZNFX1Q9P2E3 1918 aaKnown RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 BICDL2A1A5D9 508 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 SPDYE3A6NKU9 549 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 LGALS16A8MUM7 142 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 STAM2O75886 525 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 MAPTP10636 758 aaKnown RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 YBX3P16989 372 aaKnown RBP eCLIP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 HNRNPH3P31942 346 aaKnown RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 MRPS9P82933 396 aaKnown RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 CDK17Q00537 523 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 LRMPQ12912 555 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 TRIM14Q14142 442 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 GIT2Q14161 759 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 MCM6Q14566 821 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 ZRSR1Q15695 479 aaKnown RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 TPRNQ4KMQ1 711 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 CEP55Q53EZ4 464 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 USP50Q70EL3 339 aaPredicted RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 KRT26Q7Z3Y9 468 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 ZNF710Q8N1W2 664 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 RDM1Q8NG50 284 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 SYTL5Q8TDW5 730 aaPredicted RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 SNX29Q8TEQ0 813 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 TBC1D5Q92609 795 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 ERGIC2Q96RQ1 377 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 DBR1Q9UK59 544 aaKnown RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 TRAF3IP3Q9Y228 551 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 NFASCO94856 1347 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 A0A0G2JLL6 359 aaPredicted RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 STX10O60499 249 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 PPP1R37O75864 691 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 SLITRK3O94933 977 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 HOXD13P35453 343 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 COPB1P53618 953 aaKnown RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 SNAP25P60880 206 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 SYCP1Q15431 976 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 TBC1D10BQ4KMP7 808 aaPredicted RBP8.02□□□□□ -1.13
NPHP1-201ENST00000316534 ISM2Q6H9L7 571 aa8.02□□□□□ -1.13
NPHP1-201ENST00000316534 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms