RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
TRIM55-202ENST00000315962 IGSF22Q8N9C0 903 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 ACRBPQ8NEB7 543 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 AGBL3Q8NEM8 1001 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 ENOX1Q8TC92 643 aaKnown RBP8.49□□□□□ -1.05
TRIM55-202ENST00000315962 DCAF4Q8WV16 495 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 PNMA5Q96PV4 448 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 SRRTQ9BXP5 876 aaKnown RBP8.49□□□□□ -1.05
TRIM55-202ENST00000315962 FGFBP2Q9BYJ0 223 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 TRIM9Q9C026 710 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 RABEP2Q9H5N1 569 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 RAVER2Q9HCJ3 691 aaKnown RBP8.49□□□□□ -1.05
TRIM55-202ENST00000315962 BMP2KQ9NSY1 1161 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-202ENST00000315962 BLOC1S4Q9NUP1 217 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 TMX2Q9Y320 296 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 MYO3BQ8WXR4 1341 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 MYH8P13535 1937 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 NFIBO00712 420 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 SMARCA1P28370 1054 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 PAK1Q13153 545 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 PABPC4Q13310 644 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRIM55-202ENST00000315962 KRT79Q5XKE5 535 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 RAD9BQ6WBX8 426 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 HOMEZQ8IX15 550 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 PIGOQ8TEQ8 1089 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 FHDC1Q9C0D6 1143 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-202ENST00000315962 PDE11AQ9HCR9 933 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 VPS18Q9P253 973 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 PHLPP2Q6ZVD8 1323 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 ATRNL1Q5VV63 1379 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 ESYT2A0FGR8 921 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 RNF225M0QZC1 329 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-202ENST00000315962 N4BP3O15049 544 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 FLOT1O75955 427 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 ECM2O94769 699 aaPredicted RBP8.48□□□□□ -1.05
TRIM55-202ENST00000315962 ALAS1P13196 640 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 ZNF18P17022 549 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 TNIP1Q15025 636 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 TMEM266Q2M3C6 531 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 KIF4BQ2VIQ3 1234 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 SPATA1Q5VX52 437 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 MAEAQ7L5Y9 396 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 NELFCDQ8IXH7 590 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 GMCL1P1Q8NEA9 526 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 DDX12PQ92771 950 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 MTMR8Q96EF0 704 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 TRIM47Q96LD4 638 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 TEPSINQ96N21 525 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 WRNIP1Q96S55 665 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 PNKPQ96T60 521 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 GOPCQ9HD26 462 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 KBTBD4Q9NVX7 518 aa8.48□□□□□ -1.05
TRIM55-202ENST00000315962 PHF20L1A8MW92 1017 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 KLRC4O43908 158 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 PPARDQ03181 441 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 ZNF569Q5MCW4 686 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 FKBP15Q5T1M5 1219 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 ZNF658Q5TYW1 1059 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-202ENST00000315962 CNKSR2Q8WXI2 1034 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 GMCL1Q96IK5 515 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 CCSER1Q9C0I3 900 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 IKZF4Q9H2S9 585 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 EXOC1Q9NV70 894 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 GGA3Q9NZ52 723 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 CALCOCO1Q9P1Z2 691 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 TRIM10Q9UDY6 481 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 DACH1Q9UI36 760 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 ZHX2Q9Y6X8 837 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 EFCAB8A8MWE9 144 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 ARHGAP6O43182 974 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 MED24O75448 989 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 ZMYND10O75800 440 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 KLK7P49862 253 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 HIRAP54198 1017 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-202ENST00000315962 HMGCS2P54868 508 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 MRPS25P82663 173 aaKnown RBP8.47□□□□□ -1.05
TRIM55-202ENST00000315962 RBL2Q08999 1139 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 CTTNQ14247 550 aaKnown RBP8.47□□□□□ -1.05
TRIM55-202ENST00000315962 KRT31Q15323 416 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 LONRF2Q1L5Z9 754 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 ANKRD40Q6AI12 368 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 SV2BQ7L1I2 683 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 LDHDQ86WU2 507 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 LARP4BQ92615 738 aaKnown RBP8.47□□□□□ -1.05
TRIM55-202ENST00000315962 VCPKMTQ9H867 229 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 ARFGAP3Q9NP61 516 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 MRFAP1Q9Y605 127 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 ZSCAN12O43309 604 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 CBFA2T2O43439 604 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 ASNSP08243 561 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 PRPHP41219 470 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 SP4Q02446 784 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 SPECC1LQ69YQ0 1117 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 TRIML1Q8N9V2 468 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 KIAA0895Q8NCT3 520 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 CCPG1Q9ULG6 757 aa8.47□□□□□ -1.05
TRIM55-202ENST00000315962 ABCB11O95342 1321 aa8.46□□□□□ -1.05
TRIM55-202ENST00000315962 KCNJ18B7U540 433 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 EML1O00423 815 aa8.46□□□□□ -1.06
TRIM55-202ENST00000315962 LAD1O00515 517 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms