RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 SCARF1Q14162 830 aa15.02□□□□□ -0.01
SPAST-201ENST00000315285 TSNAXIP1Q2TAA8 658 aa15.02□□□□□ -0.01
SPAST-201ENST00000315285 GRAPLQ8TC17 118 aaPredicted RBP15.02□□□□□ -0.01
SPAST-201ENST00000315285 LGALS16A8MUM7 142 aa15.02□□□□□ -0.01
SPAST-201ENST00000315285 KIF28PB7ZC32 967 aa15.02□□□□□ -0.01
SPAST-201ENST00000315285 TROVE2P10155 538 aaKnown RBP eCLIP15.02□□□□□ -0.01
SPAST-201ENST00000315285 HADHQ16836 314 aaKnown RBP15.02□□□□□ -0.01
SPAST-201ENST00000315285 BRDTQ58F21 947 aaPredicted RBP15.02□□□□□ -0.01
SPAST-201ENST00000315285 ATG9AQ7Z3C6 839 aa15.02□□□□□ -0.01
SPAST-201ENST00000315285 RUNDC3BQ96NL0 473 aa15.02□□□□□ -0.01
SPAST-201ENST00000315285 NACC1Q96RE7 527 aa15.02□□□□□ -0.01
SPAST-201ENST00000315285 MLXIPQ9HAP2 919 aa15.02□□□□□ -0.01
SPAST-201ENST00000315285 ABHD10Q9NUJ1 306 aa15.02□□□□□ -0.01
SPAST-201ENST00000315285 PNMA6FA0A0J9YX94 578 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 SHC4Q6S5L8 630 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 BRINP3Q76B58 766 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 NBPF26B4DH59 902 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 SORBS3O60504 671 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 GFPT2O94808 682 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 PRR29P0C7W0 189 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 PHBP35232 272 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 RASSF2P50749 326 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 NBPF10Q6P3W6 841 aaKnown RBP15.01□□□□□ -0.01
SPAST-201ENST00000315285 NBPF15Q8N660 670 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 BBOF1Q8ND07 529 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 TRIM49BA6NDI0 452 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 LRRIQ4A6NIV6 560 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 GSG1L2A8MUP6 293 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 CAPN12Q6ZSI9 719 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 DHX36Q9H2U1 1008 aaKnown RBP15.01□□□□□ -0.01
SPAST-201ENST00000315285 ZNF148Q9UQR1 794 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 BPIFB4P59827 614 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 PPP2R5DQ14738 602 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 STK38LQ9Y2H1 464 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 PTPN22Q9Y2R2 807 aa15.01□□□□□ -0.01
SPAST-201ENST00000315285 STAM2O75886 525 aa15□□□□□ -0.01
SPAST-201ENST00000315285 C10orf76Q5T2E6 689 aa15□□□□□ -0.01
SPAST-201ENST00000315285 SDCCAG8Q86SQ7 713 aaPredicted RBP15□□□□□ -0.01
SPAST-201ENST00000315285 SMC1BQ8NDV3 1235 aa15□□□□□ -0.01
SPAST-201ENST00000315285 PBKQ96KB5 322 aa15□□□□□ -0.01
SPAST-201ENST00000315285 DBNDD1Q9H9R9 158 aa15□□□□□ -0.01
SPAST-201ENST00000315285 PTPRMP28827 1452 aa15□□□□□ -0.01
SPAST-201ENST00000315285 POLGP54098 1239 aaPredicted RBP15□□□□□ -0.01
SPAST-201ENST00000315285 GEN1Q17RS7 908 aa15□□□□□ -0.01
SPAST-201ENST00000315285 SH3RF3Q8TEJ3 882 aaPredicted RBP15□□□□□ -0.01
SPAST-201ENST00000315285 PPP1R12CQ9BZL4 782 aa15□□□□□ -0.01
SPAST-201ENST00000315285 MINPP1Q9UNW1 487 aa15□□□□□ -0.01
SPAST-201ENST00000315285 RRP15Q9Y3B9 282 aaKnown RBP15□□□□□ -0.01
SPAST-201ENST00000315285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15□□□□□ -0.01
SPAST-201ENST00000315285 CLRN2A0PK11 232 aa15□□□□□ -0.01
SPAST-201ENST00000315285 TNNC2P02585 160 aa15□□□□□ -0.01
SPAST-201ENST00000315285 MRPS9P82933 396 aaKnown RBP15□□□□□ -0.01
SPAST-201ENST00000315285 DCAF15Q66K64 600 aa15□□□□□ -0.01
SPAST-201ENST00000315285 CC2D2BQ6DHV5 1058 aa15□□□□□ -0.01
SPAST-201ENST00000315285 ZNF653Q96CK0 615 aa15□□□□□ -0.01
SPAST-201ENST00000315285 ADAMTS1Q9UHI8 967 aa15□□□□□ -0.01
SPAST-201ENST00000315285 PRCPP42785 496 aa15□□□□□ -0.01
SPAST-201ENST00000315285 UNC13DQ70J99 1090 aa15□□□□□ -0.01
SPAST-201ENST00000315285 METTL13Q8N6R0 699 aa15□□□□□ -0.01
SPAST-201ENST00000315285 SLC17A8Q8NDX2 589 aa15□□□□□ -0.01
SPAST-201ENST00000315285 ACCSQ96QU6 501 aa15□□□□□ -0.01
SPAST-201ENST00000315285 TMEM47Q9BQJ4 181 aa15□□□□□ -0.01
SPAST-201ENST00000315285 DCP1AQ9NPI6 582 aaPredicted RBP15□□□□□ -0.01
SPAST-201ENST00000315285 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
SPAST-201ENST00000315285 NMT2O60551 498 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 BFSP1Q12934 665 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 CDC37Q16543 378 aaPredicted RBP14.99□□□□□ -0.01
SPAST-201ENST00000315285 SUGCTQ9HAC7 445 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 PARVGQ9HBI0 331 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 ATP8A1Q9Y2Q0 1164 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 ZNF609O15014 1411 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 POLR2BP30876 1174 aaKnown RBP14.99□□□□□ -0.01
SPAST-201ENST00000315285 PLTPP55058 493 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 SYDE2Q5VT97 1194 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 ANO3Q9BYT9 981 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 INTS9Q9NV88 658 aaKnown RBP14.99□□□□□ -0.01
SPAST-201ENST00000315285 ANKFY1Q9P2R3 1169 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 PI4KBQ9UBF8 816 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 TMEM191BP0C7N4 346 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 PIK3CAP42336 1068 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 GRM1Q13255 1194 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 TRIM28Q13263 835 aaKnown RBP14.99□□□□□ -0.01
SPAST-201ENST00000315285 NAA30Q147X3 362 aaPredicted RBP14.99□□□□□ -0.01
SPAST-201ENST00000315285 SLC7A5Q01650 507 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 FAM182BQ5T319 152 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 BSPRYQ5W0U4 402 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 TMED8Q6PL24 325 aaPredicted RBP14.99□□□□□ -0.01
SPAST-201ENST00000315285 PROCA1Q8NCQ7 364 aaPredicted RBP14.99□□□□□ -0.01
SPAST-201ENST00000315285 ATP6V0A1Q93050 837 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 ATP2A3Q93084 1043 aa14.99□□□□□ -0.01
SPAST-201ENST00000315285 MAN1A1P33908 653 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 CA8P35219 290 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 IFNAR2P48551 515 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 YARSP54577 528 aaKnown RBP14.98□□□□□ -0.01
SPAST-201ENST00000315285 KRT81Q14533 505 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 KAZNQ674X7 775 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 ANKRD35Q8N283 1001 aa14.98□□□□□ -0.01
SPAST-201ENST00000315285 GPR101Q96P66 508 aaPredicted RBP14.98□□□□□ -0.01
SPAST-201ENST00000315285 PCIF1Q9H4Z3 704 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms