RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 CYP1A2P05177 515 aa10.14□□□□□ -0.79
BDNF-201ENST00000314915 LMOD1P29536 600 aaPredicted RBP10.14□□□□□ -0.79
BDNF-201ENST00000314915 GPC3P51654 580 aa10.14□□□□□ -0.79
BDNF-201ENST00000314915 R3HDM1Q15032 1099 aaKnown RBP10.14□□□□□ -0.79
BDNF-201ENST00000314915 C15orf59Q2T9L4 293 aaPredicted RBP10.14□□□□□ -0.79
BDNF-201ENST00000314915 LIN52Q52LA3 116 aa10.14□□□□□ -0.79
BDNF-201ENST00000314915 NCAPH2Q6IBW4 605 aa10.14□□□□□ -0.79
BDNF-201ENST00000314915 FERMT3Q86UX7 667 aa10.14□□□□□ -0.79
BDNF-201ENST00000314915 FAM133AQ8N9E0 248 aa10.14□□□□□ -0.79
BDNF-201ENST00000314915 ZIM3Q96PE6 472 aa10.14□□□□□ -0.79
BDNF-201ENST00000314915 KRT82Q9NSB4 513 aa10.14□□□□□ -0.79
BDNF-201ENST00000314915 MAGI3Q5TCQ9 1506 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 MTA2O94776 668 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 TJP3O95049 919 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 LDHCP07864 332 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 ACADSBP45954 432 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 NLRP12P59046 1061 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 SH3D19Q5HYK7 790 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 TMTC4Q5T4D3 741 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 SIRT2Q8IXJ6 389 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 POGZQ7Z3K3 1410 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 GOLGA8CPA6NN73 597 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 SPTLC2O15270 562 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 MTHFSP49914 203 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 ANKDD1AQ495B1 522 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 RUFY3Q7L099 469 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 TRPM8Q7Z2W7 1104 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 VPS50Q96JG6 964 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 MRGBPQ9NV56 204 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 NCKAP5LQ9HCH0 1330 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 ALDH1L1O75891 902 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 PRKACBP22694 351 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 BASP1P80723 227 aaKnown RBP10.13□□□□□ -0.79
BDNF-201ENST00000314915 ITGA9Q13797 1035 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 C6orf183Q5T699 404 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 CCDC174Q6PII3 467 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 SPATA24Q86W54 205 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 TC2NQ8N9U0 490 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 LILRB1Q8NHL6 650 aaPredicted RBP10.13□□□□□ -0.79
BDNF-201ENST00000314915 STK32AQ8WU08 396 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 TYW1Q9NV66 732 aaKnown RBP10.13□□□□□ -0.79
BDNF-201ENST00000314915 PLAAQ9Y263 795 aa10.13□□□□□ -0.79
BDNF-201ENST00000314915 IQSEC2Q5JU85 1478 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 SNX2O60749 519 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 GNAI2P04899 355 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 CLK1P49759 484 aaKnown RBP10.12□□□□□ -0.79
BDNF-201ENST00000314915 IKQ13123 557 aaPredicted RBP10.12□□□□□ -0.79
BDNF-201ENST00000314915 QPCTQ16769 361 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 LMOD2Q6P5Q4 547 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 RASGRP2Q7LDG7 609 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 TRAPPC11Q7Z392 1133 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 PPFIBP2Q8ND30 876 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 CAGE1Q8TC20 777 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 UQCC2Q9BRT2 126 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 KRT23Q9C075 422 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 NR2E3Q9Y5X4 410 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 SAR1BQ9Y6B6 198 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 ARHGEF11O15085 1522 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 TDRD9Q8NDG6 1382 aaKnown RBP10.12□□□□□ -0.79
BDNF-201ENST00000314915 IGF2BP3O00425 579 aaKnown RBP eCLIP10.12□□□□□ -0.79
BDNF-201ENST00000314915 ASAP2O43150 1006 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 HSPA9P38646 679 aaKnown RBP10.12□□□□□ -0.79
BDNF-201ENST00000314915 RGS2P41220 211 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 MTX1Q13505 466 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 HLTFQ14527 1009 aaKnown RBP eCLIP10.12□□□□□ -0.79
BDNF-201ENST00000314915 SYCP2LQ5T4T6 812 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 CCDC129Q6ZRS4 1044 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 MAEAQ7L5Y9 396 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 TNIP2Q8NFZ5 429 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 FNDC8Q8TC99 324 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 SH3TC2Q8TF17 1288 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 STARD8Q92502 1023 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 PMM1Q92871 262 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 SENP7Q9BQF6 1050 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 INO80BQ9C086 356 aaPredicted RBP10.12□□□□□ -0.79
BDNF-201ENST00000314915 PAG1Q9NWQ8 432 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 PTTG2Q9NZH5 202 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 SAMD15Q9P1V8 674 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 HBS1LQ9Y450 684 aaKnown RBP10.12□□□□□ -0.79
BDNF-201ENST00000314915 CPSF1Q10570 1443 aaKnown RBP10.12□□□□□ -0.79
BDNF-201ENST00000314915 VAV1P15498 845 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 VAV2P52735 878 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 RCN2Q14257 317 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 NR1D2Q14995 579 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 IL23RQ5VWK5 629 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 CCNJLQ8IV13 435 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 CHCHD4Q8N4Q1 142 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 DDHD1Q8NEL9 900 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 NSRP1Q9H0G5 558 aaKnown RBP10.12□□□□□ -0.79
BDNF-201ENST00000314915 AFF2P51816 1311 aa10.12□□□□□ -0.79
BDNF-201ENST00000314915 NVLO15381 856 aaKnown RBP10.11□□□□□ -0.79
BDNF-201ENST00000314915 ORC4O43929 436 aa10.11□□□□□ -0.79
BDNF-201ENST00000314915 SERPINB6P35237 376 aa10.11□□□□□ -0.79
BDNF-201ENST00000314915 EAPPQ56P03 285 aaPredicted RBP10.11□□□□□ -0.79
BDNF-201ENST00000314915 GSPT2Q8IYD1 628 aaKnown RBP10.11□□□□□ -0.79
BDNF-201ENST00000314915 PRCCQ92733 491 aaPredicted RBP10.11□□□□□ -0.79
BDNF-201ENST00000314915 CHMP6Q96FZ7 201 aa10.11□□□□□ -0.79
BDNF-201ENST00000314915 CEP44Q9C0F1 390 aa10.11□□□□□ -0.79
BDNF-201ENST00000314915 IL20Q9NYY1 176 aa10.11□□□□□ -0.79
BDNF-201ENST00000314915 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms