RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 KIF13BQ9NQT8 1826 aa15.27■□□□□ 0.04
MKS1-201ENST00000313863 SRRM3A6NNA2 597 aaPredicted RBP15.27■□□□□ 0.03
MKS1-201ENST00000313863 INPP5BP32019 993 aa15.27■□□□□ 0.03
MKS1-201ENST00000313863 SLC1A4P43007 532 aa15.27■□□□□ 0.03
MKS1-201ENST00000313863 IRX3P78415 501 aaPredicted RBP15.27■□□□□ 0.03
MKS1-201ENST00000313863 GFPT1Q06210 699 aaPredicted RBP15.27■□□□□ 0.03
MKS1-201ENST00000313863 NAB2Q15742 525 aa15.27■□□□□ 0.03
MKS1-201ENST00000313863 C10orf76Q5T2E6 689 aa15.27■□□□□ 0.03
MKS1-201ENST00000313863 ZIM3Q96PE6 472 aa15.27■□□□□ 0.03
MKS1-201ENST00000313863 PNMA5Q96PV4 448 aa15.27■□□□□ 0.03
MKS1-201ENST00000313863 COL24A1Q17RW2 1714 aa15.27■□□□□ 0.03
MKS1-201ENST00000313863 TNRC6CQ9HCJ0 1690 aaKnown RBP15.27■□□□□ 0.03
MKS1-201ENST00000313863 NDUFAB1O14561 156 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 SLC26A4O43511 780 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 NCK2O43639 380 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 HEXIM1O94992 359 aaKnown RBP15.26■□□□□ 0.03
MKS1-201ENST00000313863 GOLGA8HP0CJ92 632 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 ADCY7P51828 1080 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 IFI16Q16666 785 aaKnown RBP15.26■□□□□ 0.03
MKS1-201ENST00000313863 SLC4A8Q2Y0W8 1093 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 TMEM119Q4V9L6 283 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 TTMPQ5BVD1 217 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 HGSNATQ68CP4 663 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 DYMQ7RTS9 669 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 SNX29Q8TEQ0 813 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 TAF4BQ92750 862 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 HPS3Q969F9 1004 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 MTMR8Q96EF0 704 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 EYA3Q99504 573 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 ATP6V0A2Q9Y487 856 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 MYH7BA7E2Y1 1941 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 MYH4Q9Y623 1939 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 HMGB1P1B2RPK0 211 aaPredicted RBP15.26■□□□□ 0.03
MKS1-201ENST00000313863 PLCG2P16885 1265 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 EHHADHQ08426 723 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 C16orf86Q6ZW13 317 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 IQCKQ8N0W5 287 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 TGFBRAP1Q8WUH2 860 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 PSMB7Q99436 277 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 BIN2Q9UBW5 565 aaPredicted RBP15.26■□□□□ 0.03
MKS1-201ENST00000313863 SBF2Q86WG5 1849 aa15.26■□□□□ 0.03
MKS1-201ENST00000313863 BTNL10A8MVZ5 291 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 SLC18A3Q16572 532 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 FAM83BQ5T0W9 1011 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 PPP1R18Q6NYC8 613 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 ARFGAP2Q8N6H7 521 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 DDX12PQ92771 950 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 ARL8AQ96BM9 186 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 CCDC43Q96MW1 224 aaKnown RBP15.25■□□□□ 0.03
MKS1-201ENST00000313863 NAP1L4Q99733 375 aaKnown RBP15.25■□□□□ 0.03
MKS1-201ENST00000313863 EPB41L5Q9HCM4 733 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 GEMIN8Q9NWZ8 242 aaKnown RBP15.25■□□□□ 0.03
MKS1-201ENST00000313863 LEMD3Q9Y2U8 911 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 PCDHGC5Q9Y5F6 944 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 SPATA31A1Q5TZJ5 1347 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 KDM3AQ9Y4C1 1321 aa15.25■□□□□ 0.03
MKS1-201ENST00000313863 GOLGA6L10A6NI86 522 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 TRAF5O00463 557 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 BUB1O43683 1085 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 PALMO75781 387 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 MARSP56192 900 aaKnown RBP15.24■□□□□ 0.03
MKS1-201ENST00000313863 GUCY2DQ02846 1103 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 CDC37Q16543 378 aaPredicted RBP15.24■□□□□ 0.03
MKS1-201ENST00000313863 SKIDA1Q1XH10 827 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 MEI1Q5TIA1 1274 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 ANKRD13CQ8N6S4 541 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 SETDB2Q96T68 719 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 PAGR1Q9BTK6 254 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 NT5C3AQ9H0P0 336 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 RIOX1Q9H6W3 641 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 SALL4Q9UJQ4 1053 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 NFU1Q9UMS0 254 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 ANKRD65E5RJM6 399 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 GUCY2CP25092 1073 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 CDK8P49336 464 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 KCNMA1Q12791 1236 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 ZCWPW2Q504Y3 356 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 LRIG3Q6UXM1 1119 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 ZNF804AQ7Z570 1209 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 NBPF5PQ86XG9 351 aaPredicted RBP15.24■□□□□ 0.03
MKS1-201ENST00000313863 CCDC65Q8IXS2 484 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 PIGSQ96S52 555 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 LSM14BQ9BX40 385 aaKnown RBP15.24■□□□□ 0.03
MKS1-201ENST00000313863 GGA2Q9UJY4 613 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 DDX60LQ5H9U9 1706 aaKnown RBP15.24■□□□□ 0.03
MKS1-201ENST00000313863 IRS2Q9Y4H2 1338 aa15.24■□□□□ 0.03
MKS1-201ENST00000313863 SNED1Q8TER0 1413 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 GLI1P08151 1106 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 EPS15P42566 896 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 LIG3P49916 1009 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 ASPRV1Q53RT3 343 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 FAM26FQ5R3K3 315 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 PPP4R3AQ6IN85 833 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 BICDL1Q6ZP65 573 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 YTHDF3Q7Z739 585 aaKnown RBP15.23■□□□□ 0.03
MKS1-201ENST00000313863 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 IFT81Q8WYA0 676 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 PBKQ96KB5 322 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms