RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 GJA3Q9Y6H8 435 aa16.71■□□□□ 0.27
HCFC1-201ENST00000310441 E7EWF7 191 aa16.71■□□□□ 0.26
HCFC1-201ENST00000310441 ABTB1Q969K4 478 aaPredicted RBP16.71■□□□□ 0.26
HCFC1-201ENST00000310441 ZNF532Q9HCE3 1301 aa16.71■□□□□ 0.26
HCFC1-201ENST00000310441 ARHGEF10O15013 1369 aa16.71■□□□□ 0.26
HCFC1-201ENST00000310441 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.26
HCFC1-201ENST00000310441 HNRNPDLO14979 420 aaKnown RBP16.71■□□□□ 0.26
HCFC1-201ENST00000310441 BUB1O43683 1085 aa16.71■□□□□ 0.26
HCFC1-201ENST00000310441 MT-ND3P03897 115 aa16.71■□□□□ 0.26
HCFC1-201ENST00000310441 NSMFQ6X4W1 530 aa16.71■□□□□ 0.26
HCFC1-201ENST00000310441 SKAP1Q86WV1 359 aa16.71■□□□□ 0.26
HCFC1-201ENST00000310441 CPXCR1Q8N123 301 aa16.71■□□□□ 0.26
HCFC1-201ENST00000310441 TRIML2Q8N7C3 387 aa16.71■□□□□ 0.26
HCFC1-201ENST00000310441 GCNAQ96QF7 691 aa16.71■□□□□ 0.26
HCFC1-201ENST00000310441 GCFC2P16383 781 aaKnown RBP16.7■□□□□ 0.26
HCFC1-201ENST00000310441 ASPSCR1Q9BZE9 553 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 STX18Q9P2W9 335 aaKnown RBP16.7■□□□□ 0.26
HCFC1-201ENST00000310441 SYNGAP1Q96PV0 1343 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 PODXLO00592 558 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 EHHADHQ08426 723 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 FRA10AC1Q70Z53 315 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 RGS12O14924 1447 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 TRPA1O75762 1119 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 PPARAQ07869 468 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 ZNF790Q6PG37 636 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 MDM2Q00987 491 aaPredicted RBP16.7■□□□□ 0.26
HCFC1-201ENST00000310441 PATL1Q86TB9 770 aaKnown RBP16.7■□□□□ 0.26
HCFC1-201ENST00000310441 BLZF1Q9H2G9 400 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 NOP53Q9NZM5 478 aaKnown RBP16.7■□□□□ 0.26
HCFC1-201ENST00000310441 ZBTB9Q96C00 473 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 DNAJC17Q9NVM6 304 aaKnown RBP16.7■□□□□ 0.26
HCFC1-201ENST00000310441 CREB3O43889 395 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 POLR2FP61218 127 aaKnown RBP16.7■□□□□ 0.26
HCFC1-201ENST00000310441 PDIK1LQ8N165 341 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 TRMT10CQ7L0Y3 403 aaKnown RBP16.7■□□□□ 0.26
HCFC1-201ENST00000310441 MTRQ99707 1265 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 IRAK4Q9NWZ3 460 aa16.7■□□□□ 0.26
HCFC1-201ENST00000310441 MORF4L2Q15014 288 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 EMBQ6PCB8 327 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 CAPN11Q9UMQ6 739 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 KRT37O76014 449 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 ESRRAP11474 423 aaPredicted RBP16.69■□□□□ 0.26
HCFC1-201ENST00000310441 DRP2Q13474 957 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 GPATCH4Q5T3I0 446 aaKnown RBP16.69■□□□□ 0.26
HCFC1-201ENST00000310441 ARHGEF25Q86VW2 580 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 NUDCD3Q8IVD9 361 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 N4BP2L2Q92802 583 aaPredicted RBP16.69■□□□□ 0.26
HCFC1-201ENST00000310441 ADCY9O60503 1353 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 SCG2P13521 617 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 CHRNA2Q15822 529 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 LARGE2Q8N3Y3 721 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 APOA1P02647 267 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 MAML1Q92585 1016 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 FOXP1Q9H334 677 aaPredicted RBP16.69■□□□□ 0.26
HCFC1-201ENST00000310441 SUFUQ9UMX1 484 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 SMARCA1P28370 1054 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 SPOPLQ6IQ16 392 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 ARHGAP18Q8N392 663 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 USP6NLQ92738 828 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 DPH5Q9H2P9 285 aa16.69■□□□□ 0.26
HCFC1-201ENST00000310441 GCNT4Q9P109 453 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 L3MBTL1Q9Y468 752 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 SNX5Q9Y5X3 404 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 AP2B1P63010 937 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 DMTNQ08495 405 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 NEK9Q8TD19 979 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 TUBGCP2Q9BSJ2 902 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.68■□□□□ 0.26
HCFC1-201ENST00000310441 A0A1W2PQ27 194 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 A0A1W2PQ64 194 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 A0A1W2PQD8 194 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 HNRNPRO43390 633 aaKnown RBP16.68■□□□□ 0.26
HCFC1-201ENST00000310441 TJP3O95049 919 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 OCM2P0CE71 109 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 OCMP0CE72 109 aaPredicted RBP16.68■□□□□ 0.26
HCFC1-201ENST00000310441 ATP5JP18859 108 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 TECP42680 631 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 ACAD11Q709F0 780 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 SESTD1Q86VW0 696 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 MYLK4Q86YV6 388 aaPredicted RBP16.68■□□□□ 0.26
HCFC1-201ENST00000310441 C8orf37Q96NL8 207 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 KIF9Q9HAQ2 790 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 ADD3Q9UEY8 706 aaKnown RBP16.68■□□□□ 0.26
HCFC1-201ENST00000310441 LRRIQ4A6NIV6 560 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 CA4P22748 312 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 TMED2Q15363 201 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 ASPRV1Q53RT3 343 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 CNOT6LQ96LI5 555 aaKnown RBP16.68■□□□□ 0.26
HCFC1-201ENST00000310441 PALMDQ9NP74 551 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 LMBRD1Q9NUN5 540 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 KRT87PA6NCN2 255 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 GOLGA8MH3BSY2 632 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 TRIM67Q6ZTA4 783 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 MAGEB5Q9BZ81 275 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 ZBBXA8MT70 800 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 MEIS1O00470 390 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 AFPP02771 609 aaKnown RBP16.68■□□□□ 0.26
HCFC1-201ENST00000310441 ARMCX2Q7L311 632 aa16.68■□□□□ 0.26
HCFC1-201ENST00000310441 SLC7A3Q8WY07 619 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms