RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 MDH1BQ5I0G3 518 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 ZMYM1Q5SVZ6 1142 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 PPP4R3AQ6IN85 833 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 SV2BQ7L1I2 683 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 CABP7Q86V35 215 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 RPS6KC1Q96S38 1066 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 SALL3Q9BXA9 1300 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 DNM1LO00429 736 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 PTPREP23469 700 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 TECP42680 631 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 RCSD1Q6JBY9 416 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.82□□□□□ -0.526e-6■□□□□ 9
GGA2-201ENST00000309859 RILPQ96NA2 401 aa11.82□□□□□ -0.52
GGA2-201ENST00000309859 UHRF1BP1LA0JNW5 1464 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 ATP10AO60312 1499 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 ZNF233A6NK53 670 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 SEPT2Q15019 361 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 AMOTQ4VCS5 1084 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 TMEM139Q8IV31 216 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 SRRM1Q8IYB3 904 aaKnown RBP11.81□□□□□ -0.52
GGA2-201ENST00000309859 ZNF654Q8IZM8 581 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 TGS1Q96RS0 853 aaKnown RBP11.81□□□□□ -0.52
GGA2-201ENST00000309859 SPAG7O75391 227 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 PDE6CP51160 858 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 PHLDB2Q86SQ0 1253 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 ABCF3Q9NUQ8 709 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 TCEAL9Q9UHQ7 104 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 A0A0G2JND7 137 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 NEURL1BA8MQ27 555 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 AGPSO00116 658 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 FLOT1O75955 427 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 DDR1Q08345 913 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 CNNM4Q6P4Q7 775 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 CENPKQ9BS16 269 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 ETS2P15036 469 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 SERPINB3P29508 390 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 TBX2Q13207 712 aaPredicted RBP11.81□□□□□ -0.52
GGA2-201ENST00000309859 TNIP1Q15025 636 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 ANKRD20A2Q5SQ80 823 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 ANKRD20A1Q5TYW2 823 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 GBP7Q8N8V2 638 aaPredicted RBP11.81□□□□□ -0.52
GGA2-201ENST00000309859 AENQ8WTP8 325 aaKnown RBP11.81□□□□□ -0.52
GGA2-201ENST00000309859 RGL1Q9NZL6 768 aa11.81□□□□□ -0.52
GGA2-201ENST00000309859 FERP16591 822 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 TMEM237Q96Q45 408 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 CCDC84Q86UT8 332 aaPredicted RBP11.8□□□□□ -0.52
GGA2-201ENST00000309859 KIAA0556O60303 1618 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 RPS6KA3P51812 740 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 FAM89AQ96GI7 184 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 FAXDC2Q96IV6 333 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 MTUS1Q9ULD2 1270 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 BMP6P22004 513 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 CETN2P41208 172 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 DR1Q01658 176 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 LONRF1Q17RB8 773 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 NMD3Q96D46 503 aaKnown RBP11.8□□□□□ -0.52
GGA2-201ENST00000309859 ALG13Q9NP73 1137 aaKnown RBP11.8□□□□□ -0.52
GGA2-201ENST00000309859 MYOM2P54296 1465 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 DKC1O60832 514 aaKnown RBP eCLIP11.8□□□□□ -0.521e-63■■■■■ 78
GGA2-201ENST00000309859 PRPF31Q8WWY3 499 aaKnown RBP11.8□□□□□ -0.52
GGA2-201ENST00000309859 ERP27Q96DN0 273 aa11.8□□□□□ -0.52
GGA2-201ENST00000309859 NVLO15381 856 aaKnown RBP11.79□□□□□ -0.52
GGA2-201ENST00000309859 FANCBQ8NB91 859 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 P2RX5Q93086 422 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 HSPA1LP34931 641 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 PPP2R5CQ13362 524 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 UBXN6Q9BZV1 441 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 NT5C3AQ9H0P0 336 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 HAO1Q9UJM8 370 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 FBXO2Q9UK22 296 aaPredicted RBP11.79□□□□□ -0.52
GGA2-201ENST00000309859 TNFAIP3P21580 790 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 EEF1GP26641 437 aaKnown RBP11.79□□□□□ -0.52
GGA2-201ENST00000309859 PMS2P54278 862 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 RNF220Q5VTB9 566 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 DDX50Q9BQ39 737 aaKnown RBP11.79□□□□□ -0.52
GGA2-201ENST00000309859 UBN2Q6ZU65 1347 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 TNNI2P48788 182 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 TBC1D10CQ8IV04 446 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 SDR42E1Q8WUS8 393 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 EZH1Q92800 747 aaPredicted RBP11.79□□□□□ -0.52
GGA2-201ENST00000309859 EYA2O00167 538 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 ADCY8P40145 1251 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 RNASELQ05823 741 aaKnown RBP11.79□□□□□ -0.52
GGA2-201ENST00000309859 SPATA21Q7Z572 469 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 RDH13Q8NBN7 331 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 SYNCQ9H7C4 482 aa11.79□□□□□ -0.52
GGA2-201ENST00000309859 LARSQ9P2J5 1176 aaKnown RBP11.79□□□□□ -0.52
GGA2-201ENST00000309859 RNF17Q9BXT8 1623 aaKnown RBP11.79□□□□□ -0.52
GGA2-201ENST00000309859 RNF225M0QZC1 329 aaPredicted RBP11.78□□□□□ -0.52
GGA2-201ENST00000309859 CUL1Q13616 776 aa11.78□□□□□ -0.52
GGA2-201ENST00000309859 ST13P4Q8IZP2 240 aaPredicted RBP11.78□□□□□ -0.52
GGA2-201ENST00000309859 ARHGAP18Q8N392 663 aa11.78□□□□□ -0.52
GGA2-201ENST00000309859 TMTC2Q8N394 836 aa11.78□□□□□ -0.52
GGA2-201ENST00000309859 MAIP1Q8WWC4 291 aa11.78□□□□□ -0.52
GGA2-201ENST00000309859 LRRC37BQ96QE4 947 aa11.78□□□□□ -0.52
GGA2-201ENST00000309859 SMYD3Q9H7B4 428 aa11.78□□□□□ -0.52
GGA2-201ENST00000309859 TMBIM4Q9HC24 238 aa11.78□□□□□ -0.52
GGA2-201ENST00000309859 NOC2LQ9Y3T9 749 aaKnown RBP11.78□□□□□ -0.52
GGA2-201ENST00000309859 ZNF609O15014 1411 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms