RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PPP4R3AQ6IN85 833 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 NOA1Q8NC60 698 aaKnown RBP12.82□□□□□ -0.36
PTPN2-201ENST00000309660 ZDHHC15Q96MV8 337 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 CSRNP1Q96S65 589 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 SUGCTQ9HAC7 445 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 UBR3Q6ZT12 1888 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 PLIN4Q96Q06 1357 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 PVALEFA0A1B0GWK0 134 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 PLA2G4BP0C869 781 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 UBXN2AP68543 259 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 KIF5AQ12840 1032 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 GUF1Q8N442 669 aaKnown RBP12.82□□□□□ -0.36
PTPN2-201ENST00000309660 PNKPQ96T60 521 aa12.82□□□□□ -0.36
PTPN2-201ENST00000309660 FECHP22830 423 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 PPP1R2P41236 205 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 EPS15P42566 896 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 GTPBP4Q9BZE4 634 aaKnown RBP12.81□□□□□ -0.36
PTPN2-201ENST00000309660 CDK5RAP2Q96SN8 1893 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 FGFR1OPO95684 399 aaKnown RBP12.81□□□□□ -0.36
PTPN2-201ENST00000309660 NDUFB10O96000 172 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 ARHGAP4P98171 946 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 APBA1Q02410 837 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 MAN2A1Q16706 1144 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 LONRF2Q1L5Z9 754 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 DHX36Q9H2U1 1008 aaKnown RBP12.81□□□□□ -0.36
PTPN2-201ENST00000309660 LRRC53A6NM62 1247 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 PPIP5K2O43314 1243 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 CHMP2AO43633 222 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 ZRANB2O95218 330 aaKnown RBP eCLIP12.81□□□□□ -0.36
PTPN2-201ENST00000309660 TBC1D8O95759 1140 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 ORC2Q13416 577 aaPredicted RBP12.81□□□□□ -0.36
PTPN2-201ENST00000309660 DACT2Q5SW24 774 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 FBXO11Q86XK2 927 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 PRMT6Q96LA8 375 aaPredicted RBP12.81□□□□□ -0.36
PTPN2-201ENST00000309660 GDAP1L1Q96MZ0 367 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 AMNQ9BXJ7 453 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 LRRC27Q9C0I9 530 aa12.81□□□□□ -0.36
PTPN2-201ENST00000309660 SCAF8Q9UPN6 1271 aaKnown RBP12.81□□□□□ -0.36
PTPN2-201ENST00000309660 ZNF185O15231 689 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 ZMYND10O75800 440 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
PTPN2-201ENST00000309660 STRIP1Q5VSL9 837 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 CCDC65Q8IXS2 484 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 NEK11Q8NG66 645 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 CYP2W1Q8TAV3 490 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 IFIH1Q9BYX4 1025 aaKnown RBP12.8□□□□□ -0.36
PTPN2-201ENST00000309660 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.8□□□□□ -0.36
PTPN2-201ENST00000309660 SAR1BQ9Y6B6 198 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 FAM170AA1A519 330 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 C21orf2O43822 256 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 MED24O75448 989 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 CFBP00751 764 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 GCFC2P16383 781 aaKnown RBP12.8□□□□□ -0.36
PTPN2-201ENST00000309660 EIF4A3P38919 411 aaKnown RBP12.8□□□□□ -0.36
PTPN2-201ENST00000309660 CLK2P49760 499 aaKnown RBP12.8□□□□□ -0.36
PTPN2-201ENST00000309660 GYS2P54840 703 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 JAG1P78504 1218 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 TTYH3Q9C0H2 523 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 NT5C3AQ9H0P0 336 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 ANKZF1Q9H8Y5 726 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 VEZTQ9HBM0 779 aa12.8□□□□□ -0.36
PTPN2-201ENST00000309660 RAD17O75943 681 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 ECE1P42892 770 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 MATR3P43243 847 aaKnown RBP eCLIP12.79□□□□□ -0.364e-9■■■■■ 32.8
PTPN2-201ENST00000309660 PSMC6P62333 389 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 TERF2Q15554 542 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 TMEM119Q4V9L6 283 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 CCDC174Q6PII3 467 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 TRMT1LQ7Z2T5 733 aaKnown RBP12.79□□□□□ -0.36
PTPN2-201ENST00000309660 RETREG2Q8NC44 543 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 P2RX7Q99572 595 aaKnown RBP12.79□□□□□ -0.36
PTPN2-201ENST00000309660 MLXIPQ9HAP2 919 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 UTRNP46939 3433 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 OAS2P29728 719 aaKnown RBP12.79□□□□□ -0.36
PTPN2-201ENST00000309660 GABPB1Q06547 395 aaPredicted RBP12.79□□□□□ -0.36
PTPN2-201ENST00000309660 SMC1AQ14683 1233 aaKnown RBP12.79□□□□□ -0.36
PTPN2-201ENST00000309660 TMEM179Q6ZVK1 233 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 DNAJC19Q96DA6 116 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 ERGIC2Q96RQ1 377 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 MYO1AQ9UBC5 1043 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 ADAMTSL1Q8N6G6 1762 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 MEIS2O14770 477 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 VSNL1P62760 191 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 MRPS25P82663 173 aaKnown RBP12.79□□□□□ -0.36
PTPN2-201ENST00000309660 FKBP3Q00688 224 aaKnown RBP12.79□□□□□ -0.36
PTPN2-201ENST00000309660 LRRC63Q05C16 580 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 WHAMMP3Q1A5X7 153 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 SIAH1Q8IUQ4 282 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 SECISBP2LQ93073 1101 aaKnown RBP12.79□□□□□ -0.36
PTPN2-201ENST00000309660 ARHGAP20Q9P2F6 1191 aa12.79□□□□□ -0.36
PTPN2-201ENST00000309660 SFI1A8K8P3 1242 aa12.78□□□□□ -0.36
PTPN2-201ENST00000309660 BMP3P12645 472 aa12.78□□□□□ -0.36
PTPN2-201ENST00000309660 CXCR5P32302 372 aa12.78□□□□□ -0.36
PTPN2-201ENST00000309660 KIF11P52732 1056 aa12.78□□□□□ -0.36
PTPN2-201ENST00000309660 SYDE2Q5VT97 1194 aa12.78□□□□□ -0.36
PTPN2-201ENST00000309660 TCERG1LQ5VWI1 586 aa12.78□□□□□ -0.36
PTPN2-201ENST00000309660 CCDC84Q86UT8 332 aaPredicted RBP12.78□□□□□ -0.36
PTPN2-201ENST00000309660 MMS19Q96T76 1030 aa12.78□□□□□ -0.36
PTPN2-201ENST00000309660 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms