RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 MMP10P09238 476 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 CLTAP09496 248 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 SLC35G1Q2M3R5 365 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 PSTPIP2Q9H939 334 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 RAD17O75943 681 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 IFNAR2P48551 515 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 SEC24CP53992 1094 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 TBC1D16Q8TBP0 767 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 CCDC51Q96ER9 411 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 LRRC1Q9BTT6 524 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 NHEJ1Q9H9Q4 299 aaPredicted RBP13.95□□□□□ -0.18
RETREG3-201ENST00000309428 SERPINB13Q9UIV8 391 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 DAGLAQ9Y4D2 1042 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 PCDHB13Q9Y5F0 798 aa13.95□□□□□ -0.18
RETREG3-201ENST00000309428 TRPM3Q9HCF6 1732 aaPredicted RBP13.94□□□□□ -0.18
RETREG3-201ENST00000309428 A0A1B0GTH6 734 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 POTEB3A0JP26 581 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 POTECB2RU33 542 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 KCNK3O14649 394 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 PRKG1Q13976 671 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 SEPT2Q15019 361 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 PPP1R7Q15435 360 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 NPY5RQ15761 445 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 POTEBQ6S5H4 581 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 IFT20Q8IY31 132 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 COG1Q8WTW3 980 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 CTNNBL1Q8WYA6 563 aaPredicted RBP13.94□□□□□ -0.18
RETREG3-201ENST00000309428 DDX4Q9NQI0 724 aaKnown RBP13.94□□□□□ -0.18
RETREG3-201ENST00000309428 PCDHA12Q9UN75 941 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 STXBP3O00186 592 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 SSR1P43307 286 aaKnown RBP13.94□□□□□ -0.18
RETREG3-201ENST00000309428 TRIM14Q14142 442 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 PPP2R5AQ15172 486 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 RSRC2Q7L4I2 434 aaKnown RBP13.94□□□□□ -0.18
RETREG3-201ENST00000309428 FBXL16Q8N461 479 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 ZNF18P17022 549 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 USP14P54578 494 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 PIGOQ8TEQ8 1089 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 TCP11Q8WWU5 503 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 KIFC2Q96AC6 838 aa13.94□□□□□ -0.18
RETREG3-201ENST00000309428 DDX25Q9UHL0 483 aaKnown RBP13.94□□□□□ -0.18
RETREG3-201ENST00000309428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
RETREG3-201ENST00000309428 THRAP3Q9Y2W1 955 aaKnown RBP13.94□□□□□ -0.18
RETREG3-201ENST00000309428 AFF2P51816 1311 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 POTEFA5A3E0 1075 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 PPEF1O14829 653 aaPredicted RBP13.93□□□□□ -0.18
RETREG3-201ENST00000309428 POTEIP0CG38 1075 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 CTNNA1P35221 906 aaKnown RBP13.93□□□□□ -0.18
RETREG3-201ENST00000309428 LONP1P36776 959 aaKnown RBP13.93□□□□□ -0.18
RETREG3-201ENST00000309428 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
RETREG3-201ENST00000309428 POTEGQ6S5H5 508 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 POTEEQ6S8J3 1075 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 NOX5Q96PH1 765 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 BARHL2Q9NY43 387 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 TCEAL9Q9UHQ7 104 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 KIF4AO95239 1232 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 CCDC172P0C7W6 258 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 POLR2FP61218 127 aaKnown RBP13.93□□□□□ -0.18
RETREG3-201ENST00000309428 AMPD3Q01432 767 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 ADCY1Q08828 1119 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 SF3B2Q13435 895 aaKnown RBP13.93□□□□□ -0.18
RETREG3-201ENST00000309428 GPBP1Q86WP2 473 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 DGKHQ86XP1 1220 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 MS4A14Q96JA4 679 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 IKZF4Q9H2S9 585 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 STK38LQ9Y2H1 464 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 ORC4O43929 436 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 EIF4A3P38919 411 aaKnown RBP13.93□□□□□ -0.18
RETREG3-201ENST00000309428 CFAP221Q4G0U5 840 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 KRT25Q7Z3Z0 450 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 KCNK18Q7Z418 384 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 ZNF579Q8NAF0 562 aaKnown RBP13.93□□□□□ -0.18
RETREG3-201ENST00000309428 DDX12PQ92771 950 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 N4BP2L2Q92802 583 aaPredicted RBP13.93□□□□□ -0.18
RETREG3-201ENST00000309428 LACRTQ9GZZ8 138 aa13.93□□□□□ -0.18
RETREG3-201ENST00000309428 GSTTP1A0A1W2PQM5 241 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 GCOM1H8Y6P7 765 aaPredicted RBP13.92□□□□□ -0.18
RETREG3-201ENST00000309428 MYZAPP0CAP1 466 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 IRAK1P51617 712 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 PDXDC2PQ6P474 469 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 ADGRF4Q8IZF3 695 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 MB21D1Q8N884 522 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 P2RX5Q93086 422 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 HYOU1Q9Y4L1 999 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 KIF1AQ12756 1690 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 KCNJ6P48051 423 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 SARSP49591 514 aaKnown RBP13.92□□□□□ -0.18
RETREG3-201ENST00000309428 GRM4Q14833 912 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 TRIM58Q8NG06 486 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 MICAL1Q8TDZ2 1067 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 LARP4BQ92615 738 aaKnown RBP13.92□□□□□ -0.18
RETREG3-201ENST00000309428 ELMO3Q96BJ8 720 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 MRRFQ96E11 262 aaKnown RBP13.92□□□□□ -0.18
RETREG3-201ENST00000309428 RAB34Q9BZG1 259 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 BCAS3Q9H6U6 928 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 MYMKA6NI61 221 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 DNM2P50570 870 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 PAK2Q13177 524 aa13.92□□□□□ -0.18
RETREG3-201ENST00000309428 EP400NLQ6ZTU2 488 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms