RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 GPBP1Q86WP2 473 aa12.71□□□□□ -0.38
SCG2-201ENST00000305409 CHURC1Q8WUH1 139 aa12.71□□□□□ -0.38
SCG2-201ENST00000305409 DNAJC19Q96DA6 116 aa12.71□□□□□ -0.38
SCG2-201ENST00000305409 DHTKD1Q96HY7 919 aaPredicted RBP12.71□□□□□ -0.38
SCG2-201ENST00000305409 CNOT6LQ96LI5 555 aaKnown RBP12.71□□□□□ -0.38
SCG2-201ENST00000305409 WDR18Q9BV38 432 aa12.71□□□□□ -0.38
SCG2-201ENST00000305409 ZMYND15Q9H091 742 aa12.71□□□□□ -0.38
SCG2-201ENST00000305409 MAGEC2Q9UBF1 373 aaPredicted RBP12.71□□□□□ -0.38
SCG2-201ENST00000305409 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
SCG2-201ENST00000305409 MFAP3LO75121 409 aa12.7□□□□□ -0.38
SCG2-201ENST00000305409 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
SCG2-201ENST00000305409 ZKSCAN4Q969J2 545 aaPredicted RBP12.7□□□□□ -0.38
SCG2-201ENST00000305409 TUBGCP2Q9BSJ2 902 aa12.7□□□□□ -0.38
SCG2-201ENST00000305409 IRX2Q9BZI1 471 aaPredicted RBP12.7□□□□□ -0.38
SCG2-201ENST00000305409 VPS33BQ9H267 617 aa12.7□□□□□ -0.38
SCG2-201ENST00000305409 PANK4Q9NVE7 773 aa12.7□□□□□ -0.38
SCG2-201ENST00000305409 DNAI1Q9UI46 699 aa12.7□□□□□ -0.38
SCG2-201ENST00000305409 NFIBO00712 420 aa12.7□□□□□ -0.38
SCG2-201ENST00000305409 MTIF2P46199 727 aaKnown RBP12.7□□□□□ -0.38
SCG2-201ENST00000305409 COASYQ13057 564 aa12.7□□□□□ -0.38
SCG2-201ENST00000305409 MBOAT7Q96N66 472 aa12.7□□□□□ -0.38
SCG2-201ENST00000305409 TANGO6Q9C0B7 1094 aa12.7□□□□□ -0.38
SCG2-201ENST00000305409 RANBP17Q9H2T7 1088 aaKnown RBP12.7□□□□□ -0.38
SCG2-201ENST00000305409 RAVER2Q9HCJ3 691 aaKnown RBP12.7□□□□□ -0.38
SCG2-201ENST00000305409 COL2A1P02458 1487 aaPredicted RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 DDX39AO00148 427 aaKnown RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 DYNC1I1O14576 645 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 STX10O60499 249 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 KRT18P05783 430 aaKnown RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 SPATA31C1P0DKV0 1188 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 MMP14P50281 582 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 SPAG1Q07617 926 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 MTMR2Q13614 643 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 CTTNQ14247 550 aaKnown RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 TRMT1LQ7Z2T5 733 aaKnown RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 MB21D1Q8N884 522 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 PIGOQ8TEQ8 1089 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 PURBQ96QR8 312 aaKnown RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 MRPL44Q9H9J2 332 aaKnown RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 FOSP01100 380 aaPredicted RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 KRT9P35527 623 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 ZNF280AP59817 542 aaPredicted RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 ARSHQ5FYA8 562 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 HERC4Q5GLZ8 1057 aaPredicted RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 SLFN12Q8IYM2 578 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 ZNF710Q8N1W2 664 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 LRRN4CLQ8ND94 238 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 KIF18AQ8NI77 898 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 TRPM4Q8TD43 1214 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 HOOK2Q96ED9 719 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 PCMTD1Q96MG8 357 aaPredicted RBP12.69□□□□□ -0.38
SCG2-201ENST00000305409 THAP9Q9H5L6 903 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 LZTFL1Q9NQ48 299 aa12.69□□□□□ -0.38
SCG2-201ENST00000305409 ABCB11O95342 1321 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 TTC26A0AVF1 554 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 LGALS16A8MUM7 142 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 ABL1P00519 1130 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 ARP10275 920 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 ALAS1P13196 640 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 CYP11B2P19099 503 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 ERVK-24P63145 666 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 PDE4CQ08493 712 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 SPP2Q13103 211 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 Q4G0T1 1027 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
SCG2-201ENST00000305409 TRIM65Q6PJ69 517 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 ACRBPQ8NEB7 543 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 WNK4Q96J92 1243 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 CHP1Q99653 195 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 NOC4LQ9BVI4 516 aaKnown RBP12.68□□□□□ -0.38
SCG2-201ENST00000305409 COL20A1Q9P218 1284 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 IGLV3-22A0A075B6J6 115 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 PVALEFA0A1B0GWK0 134 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 BICDL2A1A5D9 508 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 RSPH10B2B2RC85 870 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 FLOT1O75955 427 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 RSPH10BP0C881 870 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 TBC1D8BQ0IIM8 1120 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 CENPPQ6IPU0 288 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 TPH2Q8IWU9 490 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 ZNF507Q8TCN5 953 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 KCND1Q9NSA2 647 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 FEM1BQ9UK73 627 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 VAV3Q9UKW4 847 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 PAXBP1Q9Y5B6 917 aa12.68□□□□□ -0.38
SCG2-201ENST00000305409 ZNF536O15090 1300 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 PSME4Q14997 1843 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 ARFGEF1Q9Y6D6 1849 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 PTGER2P43116 358 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 SLC12A3P55017 1021 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 SYCP1Q15431 976 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 FAM26FQ5R3K3 315 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 IL31RAQ8NI17 732 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 PANX2Q96RD6 677 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 WDR24Q96S15 920 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms