RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 DYNC1LI2O43237 492 aaPredicted RBP8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 DUSP11O75319 330 aaKnown RBP8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 ACRP10323 421 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 SLC16A2P36021 539 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 GUCY1B3Q02153 619 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 TNFAIP2Q03169 654 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 C1orf53Q5VUE5 145 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 MAMDC4Q6UXC1 1216 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 NSMFQ6X4W1 530 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 SGMS1Q86VZ5 419 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 C17orf53Q8N3J3 647 aaPredicted RBP8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 KLHDC9Q8NEP7 349 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 CHURC1Q8WUH1 139 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 STAG1Q8WVM7 1258 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 PPM1EQ8WY54 764 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 BPIFA3Q9BQP9 254 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 TSEN34Q9BSV6 310 aaKnown RBP8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 NAT10Q9H0A0 1025 aaKnown RBP8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 ABHD16BQ9H3Z7 469 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 NID2Q14112 1375 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 FOCADQ5VW36 1801 aa8.9□□□□□ -0.99
TM4SF1-201ENST00000305366 ALPK3Q96L96 1907 aa8.9□□□□□ -0.99
TM4SF1-201ENST00000305366 SOWAHBA6NEL2 793 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 MOXD2PA6NHM9 499 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 ATP2A1O14983 1001 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 SPTLC2O15270 562 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 FOSL2P15408 326 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 STK38Q15208 465 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 MUM1L1Q5H9M0 696 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 TMEM63BQ5T3F8 832 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 TTBK2Q6IQ55 1244 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 CPLX2Q6PUV4 134 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 CXCL17Q6UXB2 119 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 TBC1D10CQ8IV04 446 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 DHX40Q8IX18 779 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 CEP57L1Q8IYX8 460 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 MSL3Q8N5Y2 521 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 PCSK9Q8NBP7 692 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 MAFAQ8NHW3 353 aaPredicted RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 FGD4Q96M96 766 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 COL25A1Q9BXS0 654 aaPredicted RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 ACAD9Q9H845 621 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 GPCPD1Q9NPB8 672 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 A1CFQ9NQ94 594 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 PDGFCQ9NRA1 345 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 IL17RBQ9NRM6 502 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 CLIC4Q9Y696 253 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 NEDD4P46934 1319 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 FRMPD2Q68DX3 1309 aaPredicted RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 STK36Q9NRP7 1315 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 BECN2A8MW95 431 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 TIMP1P01033 207 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 CSF2RAP15509 400 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 CMA1P23946 247 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 CYP2C18P33260 490 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 LIFRP42702 1097 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 METAP2P50579 478 aaKnown RBP eCLIP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 SMAD3P84022 425 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 SF3A1Q15459 793 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 AXDND1Q5T1B0 1012 aaPredicted RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 CCSAPQ6IQ19 270 aaPredicted RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 RCSD1Q6JBY9 416 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 APOA5Q6Q788 366 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 CYB5R4Q7L1T6 521 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 ANKRD33Q7Z3H0 272 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 ZNF467Q7Z7K2 595 aaPredicted RBP8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 FAM160B2Q86V87 743 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 DRC7Q8IY82 874 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 IGDCC4Q8TDY8 1250 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 TIGD1Q96MW7 591 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.89□□□□□ -0.992e-23■□□□□ 11.2
TM4SF1-201ENST00000305366 MTA3Q9BTC8 594 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 AP5M1Q9H0R1 490 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 FAM13BQ9NYF5 915 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 KIAA1468Q9P260 1216 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 CCPG1Q9ULG6 757 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 PRR12Q9ULL5 1215 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 ROBO3Q96MS0 1386 aa8.89□□□□□ -0.99
TM4SF1-201ENST00000305366 NAV1Q8NEY1 1877 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 DNAH12Q6ZR08 3092 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 FAM237AA0A1B0GTK4 181 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 ARVCFO00192 962 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 PPP6R2O75170 966 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 NDUFA8P51970 172 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 OAZ1P54368 228 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 GJA9P57773 515 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 CHMP4BP1P59074 171 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 PSMC6P62333 389 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 GRIN2CQ14957 1233 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 SLC39A14Q15043 492 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 SYNE3Q6ZMZ3 975 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 C16orf59Q7L2K0 433 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 FBXO16Q8IX29 292 aaPredicted RBP8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 CNPY4Q8N129 248 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 PPP1R13LQ8WUF5 828 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 GMCL1Q96IK5 515 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 TOX2Q96NM4 488 aa8.88□□□□□ -0.99
TM4SF1-201ENST00000305366 KCND1Q9NSA2 647 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms