RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 TMEM221A6NGB7 291 aa11.83□□□□□ -0.52
COL4A3-201ENST00000304990 M0R296 226 aa11.83□□□□□ -0.52
COL4A3-201ENST00000304990 MBTPS2O43462 519 aa11.83□□□□□ -0.52
COL4A3-201ENST00000304990 TOP1P11387 765 aaKnown RBP11.83□□□□□ -0.52
COL4A3-201ENST00000304990 SMAD2Q15796 467 aaKnown RBP11.83□□□□□ -0.52
COL4A3-201ENST00000304990 STXBP2Q15833 593 aa11.83□□□□□ -0.52
COL4A3-201ENST00000304990 PKN1Q16512 942 aa11.83□□□□□ -0.52
COL4A3-201ENST00000304990 TSHZ3Q63HK5 1081 aa11.83□□□□□ -0.52
COL4A3-201ENST00000304990 CCDC62Q6P9F0 684 aa11.83□□□□□ -0.52
COL4A3-201ENST00000304990 NSUN6Q8TEA1 469 aaKnown RBP11.83□□□□□ -0.52
COL4A3-201ENST00000304990 SEC62Q99442 399 aaKnown RBP11.83□□□□□ -0.52
COL4A3-201ENST00000304990 FSD1Q9BTV5 496 aa11.83□□□□□ -0.52
COL4A3-201ENST00000304990 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
COL4A3-201ENST00000304990 MYH6P13533 1939 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 ATG2AQ2TAZ0 1938 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 GABBR2O75899 941 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 ZNF200P98182 395 aaPredicted RBP11.82□□□□□ -0.52
COL4A3-201ENST00000304990 SMAD4Q13485 552 aaKnown RBP11.82□□□□□ -0.52
COL4A3-201ENST00000304990 LAMC2Q13753 1193 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 MBTPS1Q14703 1052 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 IER5LQ5T953 404 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 ARHGEF16Q5VV41 709 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 FIBCD1Q8N539 461 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 WNT8BQ93098 351 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 C11orf84Q9BUA3 381 aaPredicted RBP11.82□□□□□ -0.52
COL4A3-201ENST00000304990 ZBTB40Q9NUA8 1239 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 CD207Q9UJ71 328 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL4A3-201ENST00000304990 MRVI1Q9Y6F6 885 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 WDR19Q8NEZ3 1342 aa11.82□□□□□ -0.52
COL4A3-201ENST00000304990 RBAK-RBAKDNI3L0D1 243 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 SORBS3O60504 671 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 F2P00734 622 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 NDUFV1P49821 464 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 FOXK2Q01167 660 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 TRIM71Q2Q1W2 868 aaKnown RBP11.81□□□□□ -0.52
COL4A3-201ENST00000304990 PLEKHG4Q58EX7 1191 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 TRAF7Q6Q0C0 670 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 TRIM67Q6ZTA4 783 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 BMP8AQ7Z5Y6 402 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 ATOH1Q92858 354 aaPredicted RBP11.81□□□□□ -0.52
COL4A3-201ENST00000304990 TOP1MTQ969P6 601 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 IL17RAQ96F46 866 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 TAAR1Q96RJ0 339 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 IWS1Q96ST2 819 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 RMDN3Q96TC7 470 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 TMEM47Q9BQJ4 181 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 LMAN2LQ9H0V9 348 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 IRF2BPLQ9H1B7 796 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 FAM86C1Q9NVL1 165 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 RWDD3Q9Y3V2 267 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 ZNF318Q5VUA4 2279 aa11.81□□□□□ -0.52
COL4A3-201ENST00000304990 KMT2EQ8IZD2 1858 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 C17orf102A2RUQ5 167 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 DHX16O60231 1041 aaKnown RBP11.8□□□□□ -0.52
COL4A3-201ENST00000304990 CTSHP09668 335 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 PDHBP11177 359 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 EIF2AK2P19525 551 aaKnown RBP11.8□□□□□ -0.52
COL4A3-201ENST00000304990 LTBRP36941 435 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 DLX2Q07687 328 aaPredicted RBP11.8□□□□□ -0.52
COL4A3-201ENST00000304990 HYAL1Q12794 435 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 MCF2L2Q86YR7 1114 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 FBXL6Q8N531 539 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 RGS22Q8NE09 1264 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 PPTC7Q8NI37 304 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 ATP6V0A1Q93050 837 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 PPP2R3CQ969Q6 453 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 YTHDC1Q96MU7 727 aaKnown RBP11.8□□□□□ -0.52
COL4A3-201ENST00000304990 DDX41Q9UJV9 622 aaKnown RBP11.8□□□□□ -0.52
COL4A3-201ENST00000304990 ABCB11O95342 1321 aa11.8□□□□□ -0.52
COL4A3-201ENST00000304990 COL4A6Q14031 1691 aa11.79□□□□□ -0.52
COL4A3-201ENST00000304990 HAS3O00219 553 aa11.79□□□□□ -0.52
COL4A3-201ENST00000304990 ORC4O43929 436 aa11.79□□□□□ -0.52
COL4A3-201ENST00000304990 EIF3JO75822 258 aaKnown RBP11.79□□□□□ -0.52
COL4A3-201ENST00000304990 RB1P06400 928 aa11.79□□□□□ -0.52
COL4A3-201ENST00000304990 GOLGA8HP0CJ92 632 aa11.79□□□□□ -0.52
COL4A3-201ENST00000304990 ZNF543Q08ER8 600 aa11.79□□□□□ -0.52
COL4A3-201ENST00000304990 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
COL4A3-201ENST00000304990 COL19A1Q14993 1142 aa11.79□□□□□ -0.52
COL4A3-201ENST00000304990 SERINC5Q86VE9 423 aa11.79□□□□□ -0.52
COL4A3-201ENST00000304990 SYTL5Q8TDW5 730 aaPredicted RBP11.79□□□□□ -0.52
COL4A3-201ENST00000304990 APBB2Q92870 758 aa11.79□□□□□ -0.52
COL4A3-201ENST00000304990 SPATA33Q96N06 139 aa11.79□□□□□ -0.52
COL4A3-201ENST00000304990 GRM6O15303 877 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 LINC01565O15544 149 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 TBX10O75333 385 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 PPFIA4O75335 1185 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 MYCLP12524 364 aaPredicted RBP11.78□□□□□ -0.52
COL4A3-201ENST00000304990 GTF2F1P35269 517 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL4A3-201ENST00000304990 BMPR1AP36894 532 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 NOVP48745 357 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 ZXDAP98168 799 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 TCF15Q12870 199 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 CDC37Q16543 378 aaPredicted RBP11.78□□□□□ -0.52
COL4A3-201ENST00000304990 CTC1Q2NKJ3 1217 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 ZMYM1Q5SVZ6 1142 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 TBC1D5Q92609 795 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 EMID1Q96A84 441 aaPredicted RBP11.78□□□□□ -0.52
COL4A3-201ENST00000304990 UBA5Q9GZZ9 404 aa11.78□□□□□ -0.52
COL4A3-201ENST00000304990 MLXIPQ9HAP2 919 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms