RNA–Protein interactions for RNA: ENST00000303657.9

RFX2-201, Transcript of regulatory factor X2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RFX2, Length 3,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-201ENST00000303657 DDX25Q9UHL0 483 aaKnown RBP11.79□□□□□ -0.52
RFX2-201ENST00000303657 ODF2LQ9ULJ1 636 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 PCDHA12Q9UN75 941 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 BACH1O14867 736 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 FXR1P51114 621 aaKnown RBP eCLIP11.79□□□□□ -0.52
RFX2-201ENST00000303657 GUCY2FP51841 1108 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 DPYDQ12882 1025 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 HLTFQ14527 1009 aaKnown RBP eCLIP11.79□□□□□ -0.52
RFX2-201ENST00000303657 IL17AQ16552 155 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 CCDC40Q4G0X9 1142 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 COL16A1Q07092 1604 aaPredicted RBP11.79□□□□□ -0.52
RFX2-201ENST00000303657 AHDC1Q5TGY3 1603 aaPredicted RBP11.79□□□□□ -0.52
RFX2-201ENST00000303657 FCER1AP12319 257 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 SPAG1Q07617 926 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 KRT31Q15323 416 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 TBC1D31Q96DN5 1066 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 HOMER2Q9NSB8 354 aa11.79□□□□□ -0.52
RFX2-201ENST00000303657 DDTLA6NHG4 134 aaPredicted RBP11.78□□□□□ -0.52
RFX2-201ENST00000303657 MEIS1O00470 390 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 ASPRV1Q53RT3 343 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 TCERG1LQ5VWI1 586 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 PODNQ7Z5L7 613 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 TMEM139Q8IV31 216 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 NOC4LQ9BVI4 516 aaKnown RBP11.78□□□□□ -0.52
RFX2-201ENST00000303657 PI4KBQ9UBF8 816 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 E7EVH7 732 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
RFX2-201ENST00000303657 NPY5RQ15761 445 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 FAM207AQ9NSI2 230 aaPredicted RBP11.78□□□□□ -0.52
RFX2-201ENST00000303657 HPCAL4Q9UM19 191 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 LUC7L2Q9Y383 392 aaKnown RBP11.78□□□□□ -0.52
RFX2-201ENST00000303657 GOLGA6L10A6NI86 522 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 B4DLN1 442 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 ATP1A1P05023 1023 aaKnown RBP11.78□□□□□ -0.52
RFX2-201ENST00000303657 COPB1P53618 953 aaKnown RBP11.78□□□□□ -0.52
RFX2-201ENST00000303657 CYP27A1Q02318 531 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 ARL6IP4Q66PJ3 421 aaKnown RBP11.78□□□□□ -0.52
RFX2-201ENST00000303657 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
RFX2-201ENST00000303657 MICALCLQ6ZW33 695 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 CACNA2D4Q7Z3S7 1137 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 TMC4Q7Z404 712 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 TMTC1Q8IUR5 882 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 ANKRD13CQ8N6S4 541 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 HNRNPLLQ8WVV9 542 aaKnown RBP11.78□□□□□ -0.52
RFX2-201ENST00000303657 CHP1Q99653 195 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 HSD3B7Q9H2F3 369 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 ZBTB21Q9ULJ3 1066 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 ABCA3Q99758 1704 aa11.78□□□□□ -0.52
RFX2-201ENST00000303657 DDX39AO00148 427 aaKnown RBP11.77□□□□□ -0.52
RFX2-201ENST00000303657 TRAF5O00463 557 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 OPA1O60313 960 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 FGRP09769 529 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 PLS1Q14651 629 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 HERC4Q5GLZ8 1057 aaPredicted RBP11.77□□□□□ -0.52
RFX2-201ENST00000303657 ZNF658Q5TYW1 1059 aaPredicted RBP11.77□□□□□ -0.52
RFX2-201ENST00000303657 CCDC121Q6ZUS5 278 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 COG1Q8WTW3 980 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 KIAA1024Q9UPX6 916 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 EPN1Q9Y6I3 576 aaPredicted RBP11.77□□□□□ -0.52
RFX2-201ENST00000303657 MYH3P11055 1940 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 MFAP3LO75121 409 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 PPFIA1Q13136 1202 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 SLC35G1Q2M3R5 365 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 GALNT17Q6IS24 598 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 MAEAQ7L5Y9 396 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 CNPY4Q8N129 248 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 PDGFDQ9GZP0 370 aaPredicted RBP11.77□□□□□ -0.52
RFX2-201ENST00000303657 SH3GLB2Q9NR46 395 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 SMARCAL1Q9NZC9 954 aa11.77□□□□□ -0.52
RFX2-201ENST00000303657 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 SKAP2O75563 359 aaPredicted RBP11.77□□□□□ -0.53
RFX2-201ENST00000303657 HOXA10P31260 410 aaPredicted RBP11.77□□□□□ -0.53
RFX2-201ENST00000303657 CKAP4Q07065 602 aaKnown RBP11.77□□□□□ -0.53
RFX2-201ENST00000303657 CDC37Q16543 378 aaPredicted RBP11.77□□□□□ -0.53
RFX2-201ENST00000303657 QRICH1Q2TAL8 776 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 TDRD12Q587J7 1177 aaKnown RBP11.77□□□□□ -0.53
RFX2-201ENST00000303657 WDR78Q5VTH9 848 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 NIM1KQ8IY84 436 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 CEP89Q96ST8 783 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 KANSL2Q9H9L4 492 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 JMJD4Q9H9V9 463 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 SPEF2Q9C093 1822 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 COL4A1P02462 1669 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 PNMA6FA0A0J9YX94 578 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 EIF4E1BA6NMX2 242 aaKnown RBP11.77□□□□□ -0.53
RFX2-201ENST00000303657 F5H6K3 240 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 TUBBP07437 444 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 EZRP15311 586 aaKnown RBP11.77□□□□□ -0.53
RFX2-201ENST00000303657 STAT3P40763 770 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 GUCY1A3Q02108 690 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 KLRC3Q07444 240 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 SPA17Q15506 151 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 IQCEQ6IPM2 695 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 SLC30A10Q6XR72 485 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 TTLL6Q8N841 843 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 SPZ1Q9BXG8 430 aa11.77□□□□□ -0.53
RFX2-201ENST00000303657 SLC37A4O43826 429 aa11.76□□□□□ -0.53
RFX2-201ENST00000303657 PPP1R12BO60237 982 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms