RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 F8W8V4 182 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 KCNJ6P48051 423 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 RASGRF1Q13972 1273 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 CEP85LQ5SZL2 805 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 EFCAB13Q8IY85 973 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 RPUSD2Q8IZ73 545 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 GDAP1Q8TB36 358 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 TRIM11Q96F44 468 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 RAB3IPQ96QF0 476 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 RMDN3Q96TC7 470 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 MINPP1Q9UNW1 487 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 ARL4AP40617 200 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 CACNB1Q02641 598 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 TNFAIP2Q03169 654 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 SPP2Q13103 211 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 MTMR1Q13613 665 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 VPS72Q15906 364 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 NBPF11Q86T75 865 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 YAF2Q8IY57 180 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 FAM186BQ8IYM0 893 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 FOXP1Q9H334 677 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 MOSPD1Q9UJG1 213 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 A2ML1A8K2U0 1454 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 K7ERI5 159 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 SEC24BO95487 1268 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 NR2F2P24468 414 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 ECE1P42892 770 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 PHKA2P46019 1235 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 MICALL2Q8IY33 904 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 CCNYQ8ND76 341 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 BRIP1Q9BX63 1249 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 TSPY1Q01534 308 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 SLFN12LQ6IEE8 588 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 OR6B2Q6IFH4 312 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 CCDC51Q96ER9 411 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 CLIC6Q96NY7 704 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 PUS7LQ9H0K6 701 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 PIH1D3Q9NQM4 214 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 STK17AQ9UEE5 414 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 PHLPP2Q6ZVD8 1323 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 PTCH1Q13635 1447 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 MTMR3Q13615 1198 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 NEDD9Q14511 834 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 PPP1R2P3Q6NXS1 205 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 TAB3Q8N5C8 712 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 OR6B3Q8NGW1 331 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 NSUN6Q8TEA1 469 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 PRDM10Q9NQV6 1147 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 TARBP1Q13395 1621 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 SYNMO15061 1565 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 GOLGA8SH3BPF8 625 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 CLIC2O15247 247 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 KCNQ2O43526 872 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 RECQLP46063 649 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 EVCP57679 992 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 CTTNQ14247 550 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 PSMD6Q15008 389 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 ARL13BQ3SXY8 428 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 DENND2CQ68D51 928 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 CCDC62Q6P9F0 684 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 KRBA2Q6ZNG9 492 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 TRIML1Q8N9V2 468 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 SPDYE1Q8NFV5 336 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 ATP6V0A4Q9HBG4 840 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 PARVGQ9HBI0 331 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 TOPORSQ9NS56 1045 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 RNF146Q9NTX7 359 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 MAD1L1Q9Y6D9 718 aa7.53□□□□□ -1.2
GAPVD1-202ENST00000297933 ASB14A6NK59 587 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 USP17L15C9J2P7 530 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 USP17L13C9JLJ4 530 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 USP17L11C9JVI0 530 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 USP17L18D6R9N7 530 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 USP17L22D6RA61 530 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 USP17L17D6RBQ6 530 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 USP17L19D6RCP7 530 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 USP17L20D6RJB6 530 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 KCNK3O14649 394 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 CYP27B1O15528 508 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 AFPP02771 609 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 ZNF75DP51815 510 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 USP17L24Q0WX57 530 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 SCRN1Q12765 414 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 PAK2Q13177 524 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 NXNQ6DKJ4 435 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 APOA5Q6Q788 366 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 SCARA5Q6ZMJ2 495 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 CDKL2Q92772 493 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 PLEKHF1Q96S99 279 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 CNOT7Q9UIV1 285 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 ZNRF3Q9ULT6 936 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 NCAPD2Q15021 1401 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 ABCB11O95342 1321 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 CD58P19256 250 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 CMA1P23946 247 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 ZNF131P52739 623 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 ALCAMQ13740 583 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 FAM8A1Q9UBU6 413 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 ZNF148Q9UQR1 794 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms