RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 COA7Q96BR5 231 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 DNAJC7Q99615 494 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 MMTAG2Q9BU76 263 aaKnown RBP17.23■□□□□ 0.35
UBAP1-201ENST00000297661 THAP9Q9H5L6 903 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 CAPN11Q9UMQ6 739 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 BCS1LQ9Y276 419 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 C10orf71Q711Q0 1435 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 UFL1O94874 794 aa17.22■□□□□ 0.35
UBAP1-201ENST00000297661 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
UBAP1-201ENST00000297661 TTMPQ5BVD1 217 aa17.22■□□□□ 0.35
UBAP1-201ENST00000297661 SMCR8Q8TEV9 937 aaPredicted RBP17.22■□□□□ 0.35
UBAP1-201ENST00000297661 ZMYND12Q9H0C1 365 aa17.22■□□□□ 0.35
UBAP1-201ENST00000297661 MCM8Q9UJA3 840 aa17.22■□□□□ 0.35
UBAP1-201ENST00000297661 SATB1Q01826 763 aa17.22■□□□□ 0.35
UBAP1-201ENST00000297661 PICALMQ13492 652 aa17.22■□□□□ 0.35
UBAP1-201ENST00000297661 GRAPQ13588 217 aa17.22■□□□□ 0.35
UBAP1-201ENST00000297661 LRRC47Q8N1G4 583 aaKnown RBP17.22■□□□□ 0.35
UBAP1-201ENST00000297661 DAGLBQ8NCG7 672 aa17.22■□□□□ 0.35
UBAP1-201ENST00000297661 GRAPLQ8TC17 118 aaPredicted RBP17.22■□□□□ 0.35
UBAP1-201ENST00000297661 NOC4LQ9BVI4 516 aaKnown RBP17.22■□□□□ 0.35
UBAP1-201ENST00000297661 COL11A2P13942 1736 aaPredicted RBP17.22■□□□□ 0.35
UBAP1-201ENST00000297661 NRXN2Q9P2S2 1712 aa17.22■□□□□ 0.35
UBAP1-201ENST00000297661 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
UBAP1-201ENST00000297661 CCDC70Q6NSX1 233 aa17.21■□□□□ 0.35
UBAP1-201ENST00000297661 ZNF804AQ7Z570 1209 aa17.21■□□□□ 0.35
UBAP1-201ENST00000297661 NEK8Q86SG6 692 aa17.21■□□□□ 0.35
UBAP1-201ENST00000297661 SPATS2Q86XZ4 545 aaKnown RBP17.21■□□□□ 0.35
UBAP1-201ENST00000297661 KIAA0895Q8NCT3 520 aa17.21■□□□□ 0.35
UBAP1-201ENST00000297661 NHEJ1Q9H9Q4 299 aaPredicted RBP17.21■□□□□ 0.35
UBAP1-201ENST00000297661 ZEB2O60315 1214 aa17.21■□□□□ 0.35
UBAP1-201ENST00000297661 DNM2P50570 870 aa17.21■□□□□ 0.35
UBAP1-201ENST00000297661 ATP1A2P50993 1020 aa17.21■□□□□ 0.35
UBAP1-201ENST00000297661 SOGA3Q5TF21 947 aa17.21■□□□□ 0.35
UBAP1-201ENST00000297661 GLIS3Q8NEA6 775 aa17.21■□□□□ 0.35
UBAP1-201ENST00000297661 SEC63Q9UGP8 760 aaKnown RBP17.21■□□□□ 0.35
UBAP1-201ENST00000297661 SNED1Q8TER0 1413 aa17.21■□□□□ 0.34
UBAP1-201ENST00000297661 POTEMA6NI47 508 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 A6NNZ2 444 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 F8W031 263 aaPredicted RBP17.2■□□□□ 0.34
UBAP1-201ENST00000297661 EPHB6O15197 1021 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 TDP2O95551 362 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 GSTO1P78417 241 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 TUBB8Q3ZCM7 444 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 PREPLQ4J6C6 727 aaPredicted RBP17.2■□□□□ 0.34
UBAP1-201ENST00000297661 HDAC7Q8WUI4 952 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 N4BP2L2Q92802 583 aaPredicted RBP17.2■□□□□ 0.34
UBAP1-201ENST00000297661 RUFY1Q96T51 708 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 SEMA6BQ9H3T3 888 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 C6orf50Q9HD87 102 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 FAM207AQ9NSI2 230 aaPredicted RBP17.2■□□□□ 0.34
UBAP1-201ENST00000297661 KLC4Q9NSK0 619 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 A0A1W2PQC6 194 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 SLC37A4O43826 429 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 EPB41P11171 864 aaKnown RBP17.2■□□□□ 0.34
UBAP1-201ENST00000297661 CCNE1P24864 410 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 MRPS25P82663 173 aaKnown RBP17.2■□□□□ 0.34
UBAP1-201ENST00000297661 CRY2Q49AN0 593 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 MIIPQ5JXC2 388 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 MIEF2Q96C03 454 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 NUDT12Q9BQG2 462 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 JADE2Q9NQC1 790 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 DMGDHQ9UI17 866 aaKnown RBP17.2■□□□□ 0.34
UBAP1-201ENST00000297661 IDEP14735 1019 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 NF2P35240 595 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 LRRC41Q15345 812 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 IQCEQ6IPM2 695 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 KRT25Q7Z3Z0 450 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 SH2D3CQ8N5H7 860 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 DHTKD1Q96HY7 919 aaPredicted RBP17.2■□□□□ 0.34
UBAP1-201ENST00000297661 TTYH3Q9C0H2 523 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 POLD4Q9HCU8 107 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 CD209Q9NNX6 404 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 GPCPD1Q9NPB8 672 aa17.2■□□□□ 0.34
UBAP1-201ENST00000297661 ROBO3Q96MS0 1386 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 PPP4CP60510 307 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 MFSD14BQ5SR56 506 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 RNF187Q5TA31 235 aaPredicted RBP17.19■□□□□ 0.34
UBAP1-201ENST00000297661 KCTD16Q68DU8 428 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 MICALCLQ6ZW33 695 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 REXO1Q8N1G1 1221 aaKnown RBP17.19■□□□□ 0.34
UBAP1-201ENST00000297661 TSEN2Q8NCE0 465 aaKnown RBP17.19■□□□□ 0.34
UBAP1-201ENST00000297661 EHBP1Q8NDI1 1231 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 MASTLQ96GX5 879 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 MYMKA6NI61 221 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 PRPHP41219 470 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 NAP1L1P55209 391 aaKnown RBP17.19■□□□□ 0.34
UBAP1-201ENST00000297661 NAA35Q5VZE5 725 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 GALNT17Q6IS24 598 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 C16orf86Q6ZW13 317 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 CCDC155Q8N6L0 562 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 PSMB7Q99436 277 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 LRRC1Q9BTT6 524 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 SPZ1Q9BXG8 430 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 LEMD3Q9Y2U8 911 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 CD2APQ9Y5K6 639 aa17.19■□□□□ 0.34
UBAP1-201ENST00000297661 ZNF263O14978 683 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 KRT86O43790 486 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 IBSPP21815 317 aaPredicted RBP17.18■□□□□ 0.34
UBAP1-201ENST00000297661 YTHDF3Q7Z739 585 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms