RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PNKPQ96T60 521 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 CPVLQ9H3G5 476 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 SMARCAL1Q9NZC9 954 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 MINPP1Q9UNW1 487 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 SPHKAPQ2M3C7 1700 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 TTLL1O95922 423 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 BMP3P12645 472 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 MECOMQ03112 1051 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 SETDB1Q15047 1291 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 FAM102BQ5T8I3 360 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 MYOCDQ8IZQ8 938 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 ZNF341Q9BYN7 854 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 CD209Q9NNX6 404 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 TMEM51Q9NW97 253 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 SWAP70Q9UH65 585 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 RWDD2AQ9UIY3 292 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 RNF17Q9BXT8 1623 aaKnown RBP14.68□□□□□ -0.06
HPS3-201ENST00000296051 TNNI1P19237 187 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 PPP1R2P41236 205 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 KIF11P52732 1056 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 FAM193BQ96PV7 902 aaPredicted RBP14.68□□□□□ -0.06
HPS3-201ENST00000296051 FUT8Q9BYC5 575 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 ZNF446Q9NWS9 450 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 ABL1P00519 1130 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 OR52Z1P0C646 297 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 EEF1GP26641 437 aaKnown RBP14.68□□□□□ -0.06
HPS3-201ENST00000296051 LIFRP42702 1097 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 ZBED6P86452 979 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 UAP1Q16222 522 aaPredicted RBP14.68□□□□□ -0.06
HPS3-201ENST00000296051 DENND2CQ68D51 928 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 MCTP2Q6DN12 878 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 HIBCHQ6NVY1 386 aaPredicted RBP14.68□□□□□ -0.06
HPS3-201ENST00000296051 BRIP1Q9BX63 1249 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 MTUS1Q9ULD2 1270 aa14.68□□□□□ -0.06
HPS3-201ENST00000296051 NOVA2Q9UNW9 492 aaKnown RBP14.68□□□□□ -0.06
HPS3-201ENST00000296051 OVOS2A0A0G2JMS6 1433 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 OVOS2A0A0J9YW53 1432 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 OVOS2Q6IE36 1432 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 GH2P01242 217 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 TMOD1P28289 359 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 PRPHP41219 470 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 EZH2Q15910 746 aaKnown RBP14.67□□□□□ -0.06
HPS3-201ENST00000296051 CAPN12Q6ZSI9 719 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 IKBKGQ9Y6K9 419 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 H3BQF6 201 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 ZKSCAN8Q15776 578 aaPredicted RBP14.67□□□□□ -0.06
HPS3-201ENST00000296051 GPATCH4Q5T3I0 446 aaKnown RBP14.67□□□□□ -0.06
HPS3-201ENST00000296051 SEL1L2Q5TEA6 688 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.67□□□□□ -0.06
HPS3-201ENST00000296051 APOL6Q9BWW8 343 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 ALDH8A1Q9H2A2 487 aaPredicted RBP14.67□□□□□ -0.06
HPS3-201ENST00000296051 TSKSQ9UJT2 592 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 VWA3BQ502W6 1294 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 ADD3Q9UEY8 706 aaKnown RBP14.67□□□□□ -0.06
HPS3-201ENST00000296051 PACSIN2Q9UNF0 486 aaPredicted RBP14.67□□□□□ -0.06
HPS3-201ENST00000296051 PCDHA13Q9Y5I0 950 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 ARHGAP31Q2M1Z3 1444 aa14.67□□□□□ -0.06
HPS3-201ENST00000296051 CCDC160A6NGH7 325 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 H7C1W4 665 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 CTNND1O60716 968 aaKnown RBP14.66□□□□□ -0.06
HPS3-201ENST00000296051 ASNSP08243 561 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 LONP1P36776 959 aaKnown RBP14.66□□□□□ -0.06
HPS3-201ENST00000296051 ABI1Q8IZP0 508 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 IQCA1LA6NCM1 817 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 LRRIQ4A6NIV6 560 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 CRKP46108 304 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 ATP11AP98196 1134 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 SNCBQ16143 134 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 COG1Q8WTW3 980 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 ADPGKQ9BRR6 497 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 MRPS9P82933 396 aaKnown RBP14.66□□□□□ -0.06
HPS3-201ENST00000296051 FAM133BQ5BKY9 247 aaKnown RBP14.66□□□□□ -0.06
HPS3-201ENST00000296051 SESTD1Q86VW0 696 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 FAM133AQ8N9E0 248 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 LY9Q9HBG7 655 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 STIM2Q9P246 746 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 USP17L2Q6R6M4 530 aa14.66□□□□□ -0.06
HPS3-201ENST00000296051 N4BP2L2Q92802 583 aaPredicted RBP14.66□□□□□ -0.06
HPS3-201ENST00000296051 GPBP1L1Q9HC44 474 aaPredicted RBP14.66□□□□□ -0.06
HPS3-201ENST00000296051 USP42Q9H9J4 1324 aaKnown RBP14.65□□□□□ -0.06
HPS3-201ENST00000296051 EIF4E1BA6NMX2 242 aaKnown RBP14.65□□□□□ -0.06
HPS3-201ENST00000296051 SASH3O75995 380 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 PLCG1P19174 1290 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 RBM43Q6ZSC3 357 aaKnown RBP14.65□□□□□ -0.06
HPS3-201ENST00000296051 RPAINQ86UA6 219 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 FOXP4Q8IVH2 680 aaPredicted RBP14.65□□□□□ -0.06
HPS3-201ENST00000296051 ZBTB8OSQ8IWT0 167 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 PPP1R14CQ8TAE6 165 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 OTUD5Q96G74 571 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 AMFRQ9UKV5 643 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 NMT2O60551 498 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 GUCY1A3Q02108 690 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 SPP2Q13103 211 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 TUBE1Q9UJT0 475 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 C1orf167Q5SNV9 1468 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 PLTPP55058 493 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 DHX9Q08211 1270 aaKnown RBP14.65□□□□□ -0.06
HPS3-201ENST00000296051 ADAM9Q13443 819 aa14.65□□□□□ -0.06
HPS3-201ENST00000296051 NKX1-1Q15270 411 aaPredicted RBP14.65□□□□□ -0.06
HPS3-201ENST00000296051 GPBP1Q86WP2 473 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms