RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 MTMR9Q96QG7 549 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 CCSER1Q9C0I3 900 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 MTFR1LQ9H019 292 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 GDAQ9Y2T3 454 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 BMP3P12645 472 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 PAK1Q13153 545 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 PPP1R18Q6NYC8 613 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 JDP2Q8WYK2 163 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 GLIS2Q9BZE0 524 aaPredicted RBP20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 VIPAS39Q9H9C1 493 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 SUGCTQ9HAC7 445 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 SMCHD1A6NHR9 2005 aa20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 N4BP1O75113 896 aaKnown RBP20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 RPN1P04843 607 aaKnown RBP20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 MRPL12P52815 198 aaKnown RBP20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 RASSF7Q02833 373 aa20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 TCP11X2Q5H9J9 407 aa20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 SAMD1Q6SPF0 538 aaPredicted RBP20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 RRP15Q9Y3B9 282 aaKnown RBP20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 MYH7BA7E2Y1 1941 aa20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 ABL1P00519 1130 aa20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 MCM3P25205 808 aa20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 GMCL1Q96IK5 515 aa20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 MYOZ2Q9NPC6 264 aa20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 ZBTB21Q9ULJ3 1066 aa20.37■□□□□ 0.85
PDLIM3-201ENST00000284767 COL2A1P02458 1487 aaPredicted RBP20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 ARFGEF1Q9Y6D6 1849 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 ASTN2O75129 1339 aaPredicted RBP20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 NOA1Q8NC60 698 aaKnown RBP20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 NUDT12Q9BQG2 462 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 RMND1Q9NWS8 449 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 KCNJ18B7U540 433 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 KRT9P35527 623 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 PRELPP51888 382 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 KCNJ12Q14500 433 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 SYDE2Q5VT97 1194 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 CCDC102AQ96A19 550 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 SLF1Q9BQI6 1058 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 VPS16Q9H269 839 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 LCMT1Q9UIC8 334 aa20.36■□□□□ 0.85
PDLIM3-201ENST00000284767 TFRCP02786 760 aaKnown RBP20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 TRAPPC11Q7Z392 1133 aa20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 EPN1Q9Y6I3 576 aaPredicted RBP20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 RNF225M0QZC1 329 aaPredicted RBP20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 MEIS2O14770 477 aa20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 FAM83BQ5T0W9 1011 aa20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 ZNF658Q5TYW1 1059 aaPredicted RBP20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 ZBED3Q96IU2 234 aaPredicted RBP20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 HAUS4Q9H6D7 363 aa20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 TAB2Q9NYJ8 693 aa20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 DDX25Q9UHL0 483 aaKnown RBP20.35■□□□□ 0.85
PDLIM3-201ENST00000284767 NDUFA10O95299 355 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 NELFBQ8WX92 580 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 HAS1Q92839 578 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 AK8Q96MA6 479 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 VPS33BQ9H267 617 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 KBTBD4Q9NVX7 518 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 LRWD1Q9UFC0 647 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 PGAP2Q9UHJ9 254 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 PRR12Q9ULL5 1215 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 FER1L6Q2WGJ9 1857 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 AARSP49588 968 aaKnown RBP eCLIP20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 MAP9Q49MG5 647 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 SAMD7Q7Z3H4 446 aa20.34■□□□□ 0.85
PDLIM3-201ENST00000284767 LRRIQ3A6PVS8 624 aaPredicted RBP20.33■□□□□ 0.85
PDLIM3-201ENST00000284767 HOXA13P31271 388 aaPredicted RBP20.33■□□□□ 0.85
PDLIM3-201ENST00000284767 NCAPH2Q6IBW4 605 aa20.33■□□□□ 0.85
PDLIM3-201ENST00000284767 FBXO11Q86XK2 927 aa20.33■□□□□ 0.85
PDLIM3-201ENST00000284767 C10orf67Q8IYJ2 551 aa20.33■□□□□ 0.85
PDLIM3-201ENST00000284767 MTMR14Q8NCE2 650 aa20.33■□□□□ 0.85
PDLIM3-201ENST00000284767 AMNQ9BXJ7 453 aa20.33■□□□□ 0.85
PDLIM3-201ENST00000284767 BRCA1P38398 1863 aaKnown RBP20.33■□□□□ 0.85
PDLIM3-201ENST00000284767 KLRC4O43908 158 aa20.33■□□□□ 0.84
PDLIM3-201ENST00000284767 PRCPP42785 496 aa20.33■□□□□ 0.84
PDLIM3-201ENST00000284767 USP14P54578 494 aa20.33■□□□□ 0.84
PDLIM3-201ENST00000284767 RASA3Q14644 834 aa20.33■□□□□ 0.84
PDLIM3-201ENST00000284767 RPGRIP1Q96KN7 1286 aa20.33■□□□□ 0.84
PDLIM3-201ENST00000284767 ANO3Q9BYT9 981 aa20.33■□□□□ 0.84
PDLIM3-201ENST00000284767 REXO2Q9Y3B8 237 aaKnown RBP20.33■□□□□ 0.84
PDLIM3-201ENST00000284767 VGLL3A8MV65 326 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 H7C1D1 291 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 OPLAHO14841 1288 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 UBXN1Q04323 297 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 GRB10Q13322 594 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 ZNF662Q6ZS27 426 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 OR8K1Q8NGG5 319 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 ARHGEF10LQ9HCE6 1279 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 TMX2Q9Y320 296 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 GJA3Q9Y6H8 435 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 PPP4R3AQ6IN85 833 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 PNMA5Q96PV4 448 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 DNAJC7Q99615 494 aa20.32■□□□□ 0.84
PDLIM3-201ENST00000284767 A0A1W2PQC6 194 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 TARSL2A2RTX5 802 aaKnown RBP20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 TRIM49BA6NDI0 452 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 TRIM66O15016 1216 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 DGKZQ13574 1117 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 EHBP1Q8NDI1 1231 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 NLGN2Q8NFZ4 835 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 HPS3Q969F9 1004 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms