RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ZNF287Q9HBT7 754 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 NGRNQ9NPE2 291 aaKnown RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 SH2B1Q9NRF2 756 aaPredicted RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 KLHL11Q9NVR0 708 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 COQ6Q9Y2Z9 468 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 PCDHA8Q9Y5H6 950 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 PIK3C2BO00750 1634 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 KIF14Q15058 1648 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 CBFA2T2O43439 604 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 SOD2P04179 222 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 RPN1P04843 607 aaKnown RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 CD3EP07766 207 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 MSX1P28360 303 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 KLF1Q13351 362 aaPredicted RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 ADCK5Q3MIX3 580 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 DHX32Q7L7V1 743 aaKnown RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 ENOX1Q8TC92 643 aaKnown RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 VMP1Q96GC9 406 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 ZIC5Q96T25 663 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 VPS11Q9H270 941 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 RASSF4Q9H2L5 321 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 MEIS1O00470 390 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 PRKD3O94806 890 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 SKIDA1Q1XH10 827 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 RILPL1Q5EBL4 403 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 KSR1Q8IVT5 923 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 FLCNQ8NFG4 579 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 FMNL2Q96PY5 1086 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 KLHL25Q9H0H3 589 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 GPR55Q9Y2T6 319 aaPredicted RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 IQGAP3Q86VI3 1631 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 RNGTTO60942 597 aaKnown RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 SKAP2O75563 359 aaPredicted RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 MTHFD2P13995 350 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 MAOBP27338 520 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 GRK4P32298 578 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 NLRP12P59046 1061 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 CTC1Q2NKJ3 1217 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 HAUS3Q68CZ6 603 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 MZT2BQ6NZ67 158 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 SHQ1Q6PI26 577 aaKnown RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 C7orf31Q8N865 590 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 RBBP8NLQ8NC74 664 aaPredicted RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 FAXDC2Q96IV6 333 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 ACO2Q99798 780 aaKnown RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 DPH2Q9BQC3 489 aaPredicted RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 OLA1Q9NTK5 396 aaKnown RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 DNAJC28Q9NX36 388 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 ABCA6Q8N139 1617 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 ZFYVE16Q7Z3T8 1539 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 LTBP3Q9NS15 1303 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 POM121BA6NF01 834 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 KPNA5O15131 536 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 LTBRP36941 435 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 ADCYAP1R1P41586 468 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 RNF4P78317 190 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 FAAP100Q0VG06 881 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 PRPF4BQ13523 1007 aaKnown RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 SLC44A4Q53GD3 710 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 CFAP161Q6P656 301 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 DPP9Q86TI2 863 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 SYTL1Q8IYJ3 562 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 BHLHE41Q9C0J9 482 aaPredicted RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 KMT5AQ9NQR1 393 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 DNM3Q9UQ16 869 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 POLR3KQ9Y2Y1 108 aaPredicted RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 ARHGEF12Q9NZN5 1544 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 EIF3FO00303 357 aaPredicted RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 EGFRP00533 1210 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 ASGR2P07307 311 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 RHCEP18577 417 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 SOX18P35713 384 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 SLC5A3P53794 718 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 RHDQ02161 417 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 TRIM29Q14134 588 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 CRY1Q16526 586 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 KCT2Q8NC54 265 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 SMARCC1Q92922 1105 aaPredicted RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 ACAP3Q96P50 834 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 CGGBP1Q9UFW8 167 aaPredicted RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 PCDHA2Q9Y5H9 948 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 ADAMTSL3P82987 1691 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 RRN3P2A6NIE6 340 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 FAM227AF5H4B4 570 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 FGAP02671 866 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 NEXNQ0ZGT2 675 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 LRMPQ12912 555 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 PSAPL1Q6NUJ1 521 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 CPLX4Q7Z7G2 160 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 LIX1LQ8IVB5 337 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 OR8H2Q8N162 312 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 PGBD4Q96DM1 585 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 NUP88Q99567 741 aaPredicted RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 SIL1Q9H173 461 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 VTA1Q9NP79 307 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 SH3GLB2Q9NR46 395 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 ARHGEF4Q9NR80 690 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 TTC37Q6PGP7 1564 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 RPRD2Q5VT52 1461 aaKnown RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 CDC14CA4D256 554 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms