RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PRCPP42785 496 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 USP11P51784 963 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 ARHGAP4P98171 946 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 TEX2Q8IWB9 1127 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 NAP1L4Q99733 375 aaKnown RBP23.5■■□□□ 1.35
YBX3-202ENST00000279550 C7orf25Q9BPX7 421 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 TRIM9Q9C026 710 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 PNMA2Q9UL42 364 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 MAPK8IP1Q9UQF2 711 aa23.5■■□□□ 1.35
YBX3-202ENST00000279550 PASKQ96RG2 1323 aa23.49■■□□□ 1.35
YBX3-202ENST00000279550 HOXA13P31271 388 aaPredicted RBP23.49■■□□□ 1.35
YBX3-202ENST00000279550 DHX8Q14562 1220 aaKnown RBP23.49■■□□□ 1.35
YBX3-202ENST00000279550 TMEM119Q4V9L6 283 aa23.49■■□□□ 1.35
YBX3-202ENST00000279550 SNX29Q8TEQ0 813 aa23.49■■□□□ 1.35
YBX3-202ENST00000279550 NELFBQ8WX92 580 aa23.49■■□□□ 1.35
YBX3-202ENST00000279550 KCNMB3Q9NPA1 279 aa23.49■■□□□ 1.35
YBX3-202ENST00000279550 RWDD2AQ9UIY3 292 aa23.49■■□□□ 1.35
YBX3-202ENST00000279550 PIK3CDO00329 1044 aa23.48■■□□□ 1.35
YBX3-202ENST00000279550 RHOBTB3O94955 611 aa23.48■■□□□ 1.35
YBX3-202ENST00000279550 SKILP12757 684 aa23.48■■□□□ 1.35
YBX3-202ENST00000279550 OAZ1P54368 228 aa23.48■■□□□ 1.35
YBX3-202ENST00000279550 HUNKP57058 714 aa23.48■■□□□ 1.35
YBX3-202ENST00000279550 PAK1Q13153 545 aa23.48■■□□□ 1.35
YBX3-202ENST00000279550 KCNK18Q7Z418 384 aa23.48■■□□□ 1.35
YBX3-202ENST00000279550 ADSSL1Q8N142 457 aa23.48■■□□□ 1.35
YBX3-202ENST00000279550 CCDC150Q8NCX0 1101 aa23.48■■□□□ 1.35
YBX3-202ENST00000279550 ZNF214Q9UL59 606 aaPredicted RBP23.48■■□□□ 1.35
YBX3-202ENST00000279550 IRX3P78415 501 aaPredicted RBP23.47■■□□□ 1.35
YBX3-202ENST00000279550 MCM6Q14566 821 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 ECM1Q16610 540 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 MCTP2Q6DN12 878 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 MS4A4AQ96JQ5 239 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 RAB34Q9BZG1 259 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 ATP2A1O14983 1001 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 CFBP00751 764 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 ZBTB48P10074 688 aaPredicted RBP23.47■■□□□ 1.35
YBX3-202ENST00000279550 ALAS1P13196 640 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 SREBF1P36956 1147 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 GTF2A2P52657 109 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 TMEM132BQ14DG7 1078 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 GPAT2Q6NUI2 795 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 MOXD1Q6UVY6 613 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 SMC1BQ8NDV3 1235 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 TBC1D5Q92609 795 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 ASCC2Q9H1I8 757 aaPredicted RBP23.47■■□□□ 1.35
YBX3-202ENST00000279550 STK17AQ9UEE5 414 aa23.47■■□□□ 1.35
YBX3-202ENST00000279550 R3HCC1Q9Y3T6 440 aaKnown RBP23.47■■□□□ 1.35
YBX3-202ENST00000279550 A0A1B0GTH6 734 aa23.46■■□□□ 1.35
YBX3-202ENST00000279550 MARCH6O60337 910 aa23.46■■□□□ 1.35
YBX3-202ENST00000279550 ASIC1P78348 528 aa23.46■■□□□ 1.35
YBX3-202ENST00000279550 GOLGA8FQ08AF8 430 aa23.46■■□□□ 1.35
YBX3-202ENST00000279550 GOLGA8DPQ0D2H9 430 aa23.46■■□□□ 1.35
YBX3-202ENST00000279550 MKRN3Q13064 507 aaKnown RBP23.46■■□□□ 1.35
YBX3-202ENST00000279550 PABPC4Q13310 644 aaKnown RBP eCLIP23.46■■□□□ 1.352e-11■■■□□ 14.9
YBX3-202ENST00000279550 SPRYD7Q5W111 196 aa23.46■■□□□ 1.35
YBX3-202ENST00000279550 KRT79Q5XKE5 535 aa23.46■■□□□ 1.35
YBX3-202ENST00000279550 GIMAP8Q8ND71 665 aaPredicted RBP23.46■■□□□ 1.35
YBX3-202ENST00000279550 CLEC4DQ8WXI8 215 aa23.46■■□□□ 1.35
YBX3-202ENST00000279550 CDK5RAP3Q96JB5 506 aa23.46■■□□□ 1.35
YBX3-202ENST00000279550 MYMKA6NI61 221 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 GCOM1H8Y6P7 765 aaPredicted RBP23.45■■□□□ 1.34
YBX3-202ENST00000279550 FOSP01100 380 aaPredicted RBP23.45■■□□□ 1.34
YBX3-202ENST00000279550 POLR2MP0CAP2 368 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 CETPP11597 493 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 TBX2Q13207 712 aaPredicted RBP23.45■■□□□ 1.34
YBX3-202ENST00000279550 NR1I3Q14994 352 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 RAD54LQ92698 747 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 LENG9Q96B70 501 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 HOMER2Q9NSB8 354 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 PCDHA12Q9UN75 941 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 COL11A1P12107 1806 aaPredicted RBP23.45■■□□□ 1.34
YBX3-202ENST00000279550 SPDYE3A6NKU9 549 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 NFIBO00712 420 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 SNRNP48Q6IEG0 339 aaKnown RBP23.45■■□□□ 1.34
YBX3-202ENST00000279550 LBX2Q6XYB7 198 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 SV2BQ7L1I2 683 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 SAPCD2Q86UD0 394 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 MB21D1Q8N884 522 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 ETNPPLQ8TBG4 499 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 LARP4BQ92615 738 aaKnown RBP23.45■■□□□ 1.34
YBX3-202ENST00000279550 TEX13BQ9BXU2 312 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 RIPK3Q9Y572 518 aa23.45■■□□□ 1.34
YBX3-202ENST00000279550 TRIM49BA6NDI0 452 aa23.44■■□□□ 1.34
YBX3-202ENST00000279550 FAM86B1E9PN63 330 aa23.44■■□□□ 1.34
YBX3-202ENST00000279550 TEX33O43247 280 aa23.44■■□□□ 1.34
YBX3-202ENST00000279550 FAM86B2P0C5J1 330 aa23.44■■□□□ 1.34
YBX3-202ENST00000279550 SFPQP23246 707 aaKnown RBP eCLIP23.44■■□□□ 1.34
YBX3-202ENST00000279550 STAT3P40763 770 aa23.44■■□□□ 1.34
YBX3-202ENST00000279550 PMS1P54277 932 aaKnown RBP23.44■■□□□ 1.34
YBX3-202ENST00000279550 PRR16Q569H4 304 aa23.44■■□□□ 1.34
YBX3-202ENST00000279550 MUM1L1Q5H9M0 696 aa23.44■■□□□ 1.34
YBX3-202ENST00000279550 POTEEQ6S8J3 1075 aa23.44■■□□□ 1.34
YBX3-202ENST00000279550 TRERF1Q96PN7 1200 aa23.44■■□□□ 1.34
YBX3-202ENST00000279550 USP27XA6NNY8 438 aa23.43■■□□□ 1.34
YBX3-202ENST00000279550 HSD17B4P51659 736 aa23.43■■□□□ 1.34
YBX3-202ENST00000279550 HERVK_113P62684 666 aa23.43■■□□□ 1.34
YBX3-202ENST00000279550 PDE4DQ08499 809 aa23.43■■□□□ 1.34
YBX3-202ENST00000279550 TPD52L1Q16890 204 aaPredicted RBP23.43■■□□□ 1.34
YBX3-202ENST00000279550 Q4G0T1 1027 aa23.43■■□□□ 1.34
YBX3-202ENST00000279550 FCHSD1Q86WN1 690 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms