RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 EHMT1Q9H9B1 1298 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 ITIH6Q6UXX5 1313 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 STX10O60499 249 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 SPATA31C1P0DKV0 1188 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 RBL2Q08999 1139 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 PTPN14Q15678 1187 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 ANGEL2Q5VTE6 544 aaKnown RBP10.7□□□□□ -0.7
TRIM55-201ENST00000276573 HAUS3Q68CZ6 603 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 ARHGAP27Q6ZUM4 889 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 APOBEC3FQ8IUX4 373 aaKnown RBP10.7□□□□□ -0.7
TRIM55-201ENST00000276573 GUF1Q8N442 669 aaKnown RBP10.7□□□□□ -0.7
TRIM55-201ENST00000276573 CSGALNACT2Q8N6G5 542 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 BAG1Q99933 345 aaPredicted RBP10.7□□□□□ -0.7
TRIM55-201ENST00000276573 WDR18Q9BV38 432 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 EMILIN3Q9NT22 766 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 GPRC5DQ9NZD1 345 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 MAGEC2Q9UBF1 373 aaPredicted RBP10.7□□□□□ -0.7
TRIM55-201ENST00000276573 VAV3Q9UKW4 847 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 CCPG1Q9ULG6 757 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 ATAD5Q96QE3 1844 aa10.69□□□□□ -0.7
TRIM55-201ENST00000276573 ARHGAP6O43182 974 aa10.69□□□□□ -0.7
TRIM55-201ENST00000276573 SSBP05455 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRIM55-201ENST00000276573 CYP11B2P19099 503 aa10.69□□□□□ -0.7
TRIM55-201ENST00000276573 HSD17B4P51659 736 aa10.69□□□□□ -0.7
TRIM55-201ENST00000276573 MYRIPQ8NFW9 859 aa10.69□□□□□ -0.7
TRIM55-201ENST00000276573 CPLX3Q8WVH0 158 aa10.69□□□□□ -0.7
TRIM55-201ENST00000276573 CLEC4DQ8WXI8 215 aa10.69□□□□□ -0.7
TRIM55-201ENST00000276573 PANX2Q96RD6 677 aa10.69□□□□□ -0.7
TRIM55-201ENST00000276573 POLR3CQ9BUI4 534 aaPredicted RBP10.69□□□□□ -0.7
TRIM55-201ENST00000276573 PANK4Q9NVE7 773 aa10.69□□□□□ -0.7
TRIM55-201ENST00000276573 DNM3Q9UQ16 869 aa10.69□□□□□ -0.7
TRIM55-201ENST00000276573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRIM55-201ENST00000276573 POTEFA5A3E0 1075 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 CCP110O43303 1012 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 PSMD10O75832 226 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 USP14P54578 494 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 SLC12A3P55017 1021 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 PSMC6P62333 389 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 UBXN2AP68543 259 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 UBXN1Q04323 297 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 COASYQ13057 564 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 SPP2Q13103 211 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 DGKZQ13574 1117 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 CEP55Q53EZ4 464 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 ARSHQ5FYA8 562 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 PRAMEF18Q5VWM3 479 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 CEP135Q66GS9 1140 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 POTEGQ6S5H5 508 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 POTEEQ6S8J3 1075 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 OTOP1Q7RTM1 612 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 GPBP1Q86WP2 473 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 FAM114A1Q8IWE2 563 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 SCYL3Q8IZE3 742 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 GPC2Q8N158 579 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 MB21D1Q8N884 522 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 SYT2Q8N9I0 419 aaPredicted RBP10.68□□□□□ -0.7
TRIM55-201ENST00000276573 ZNF507Q8TCN5 953 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 TRPM4Q8TD43 1214 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 SLC5A5Q92911 643 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 PPP1R13BQ96KQ4 1090 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 SLC38A10Q9HBR0 1119 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 UQCRHLA0A096LP55 91 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 LGALS16A8MUM7 142 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 EML1O00423 815 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 MEIS1O00470 390 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 UQCRHP07919 91 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 PTPRAP18433 802 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 LMNB1P20700 586 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 HIRAP54198 1017 aaPredicted RBP10.68□□□□□ -0.7
TRIM55-201ENST00000276573 GHRHRQ02643 423 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 MTMR2Q13614 643 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 MCF2L2Q86YR7 1114 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 CCDC65Q8IXS2 484 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 KCTD17Q8N5Z5 321 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 ZKSCAN4Q969J2 545 aaPredicted RBP10.68□□□□□ -0.7
TRIM55-201ENST00000276573 EIF2AK1Q9BQI3 630 aaKnown RBP10.68□□□□□ -0.7
TRIM55-201ENST00000276573 TANGO6Q9C0B7 1094 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 RPAP3Q9H6T3 665 aaPredicted RBP10.68□□□□□ -0.7
TRIM55-201ENST00000276573 RAVER2Q9HCJ3 691 aaKnown RBP10.68□□□□□ -0.7
TRIM55-201ENST00000276573 PPP1R9AQ9ULJ8 1098 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 RABGAP1Q9Y3P9 1069 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 PAXBP1Q9Y5B6 917 aa10.68□□□□□ -0.7
TRIM55-201ENST00000276573 PITPNM2Q9BZ72 1349 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 NPHP3-ACAD11A0A0J9YXS1 232 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 ZBED4O75132 1171 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 FLOT1O75955 427 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 FGFR1OPO95684 399 aaKnown RBP10.67□□□□□ -0.7
TRIM55-201ENST00000276573 GYPCP04921 128 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 FDX1P10109 184 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 ARP10275 920 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 ALAS1P13196 640 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 VCAM1P19320 739 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 CASP14P31944 242 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 EPS15P42566 896 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 DNM2P50570 870 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 BACE1P56817 501 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 LRRC41Q15345 812 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 FAM26FQ5R3K3 315 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 FOXR2Q6PJQ5 311 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms