RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 GYG2O15488 501 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 SERPINB2P05120 415 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 CAV1Q03135 178 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 PTPROQ16827 1216 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 OR9Q1Q8NGQ5 310 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 JAG2Q9Y219 1238 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 UHRF1BP1Q6BDS2 1440 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 CFLARO15519 480 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 PSMD2Q13200 908 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 NUGGCQ68CJ6 796 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 ANO5Q75V66 913 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 NUDCD3Q8IVD9 361 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 IFNL3Q8IZI9 196 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 PDIK1LQ8N165 341 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 USP6NLQ92738 828 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 SUN2Q9UH99 717 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 MED7O43513 233 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 PLS3P13797 630 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 ATP2B4P23634 1241 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 HP1BP3Q5SSJ5 553 aaPredicted RBP9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 TRAPPC3LQ5T215 181 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 SSH3Q8TE77 659 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 PIK3R5Q8WYR1 880 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 CHMP6Q96FZ7 201 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 PCDHB4Q9Y5E5 795 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 CLIC4Q9Y696 253 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 ANO9A1A5B4 782 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 PPP1R12AO14974 1030 aaPredicted RBP9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 PYGLP06737 847 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 SLFN14P0C7P3 912 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 NR2F2P24468 414 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 FKBP3Q00688 224 aaKnown RBP9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 MAPKAPK5Q8IW41 473 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 ACCSQ96QU6 501 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 AS3MTQ9HBK9 375 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 NRBP1Q9UHY1 535 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 ABCC4O15439 1325 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 SEMA3EO15041 775 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 NDUFA10O95299 355 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 MMEP08473 750 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 DLATP10515 647 aaKnown RBP9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 ATICP31939 592 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 RHOT2Q8IXI1 618 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 MAML1Q92585 1016 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 LRRC59Q96AG4 307 aaKnown RBP9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 CLIC6Q96NY7 704 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 NBPF3Q9H094 633 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 TMEM206Q9H813 350 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 NHEJ1Q9H9Q4 299 aaPredicted RBP9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 SLC5A4Q9NY91 659 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 PCDHA13Q9Y5I0 950 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 TNKSO95271 1327 aa9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 URB2Q14146 1524 aaKnown RBP9.4□□□□□ -0.91
SCUBE3-201ENST00000274938 DNMBPQ6XZF7 1577 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 TLR3O15455 904 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 GCFC2P16383 781 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 PDIA3P30101 505 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 AP2B1P63010 937 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 PTGDRQ13258 359 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 FLOT2Q14254 428 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 DARS2Q6PI48 645 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 FBXO38Q6PIJ6 1188 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 ARMC2Q8NEN0 867 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 TESK2Q96S53 571 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 WARS2Q9UGM6 360 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 APOBEC2Q9Y235 224 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 RASSF10A6NK89 507 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 BTBD18B2RXH4 712 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 CTIFO43310 598 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 MOCS3O95396 460 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 DRP2Q13474 957 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 FAM160B1Q5W0V3 765 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 CNPY4Q8N129 248 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 TAB3Q8N5C8 712 aaPredicted RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 GDAP1Q8TB36 358 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 SKA2Q8WVK7 121 aaPredicted RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 PGBD1Q96JS3 809 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 TEX12Q9BXU0 123 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 YIPF3Q9GZM5 350 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 SLC13A4Q9UKG4 626 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 HSPA4LO95757 839 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 STAT2P52630 851 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 RWDD2BP57060 319 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 FAM47AQ5JRC9 791 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 PLA2G4DQ86XP0 818 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 CPXCR1Q8N123 301 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 DEPDC1BQ8WUY9 529 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 LRRC37BQ96QE4 947 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 ELAC2Q9BQ52 826 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 RNF26Q9BY78 433 aaPredicted RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 TRAPPC8Q9Y2L5 1435 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 HAUS5O94927 633 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 DNAJC24Q6P3W2 148 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 TRIM67Q6ZTA4 783 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 BZW1Q7L1Q6 419 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 MLXIPQ9HAP2 919 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 ARHGAP26Q9UNA1 814 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 PLAAQ9Y263 795 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 KPNA7A9QM74 516 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 MIF4GDA9UHW6 222 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms