RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 LRRN2O75325 713 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 XRCC5P13010 732 aaKnown RBP13.84□□□□□ -0.19
UBXN4-201ENST00000272638 VSNL1P62760 191 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 WHAMMP3Q1A5X7 153 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 PI4KBQ9UBF8 816 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 LIMA1Q9UHB6 759 aaKnown RBP13.84□□□□□ -0.19
UBXN4-201ENST00000272638 KCNK3O14649 394 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 BMP3P12645 472 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 KRT13P13646 458 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 MAP3K9P80192 1104 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 TERF2Q15554 542 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 KCTD16Q68DU8 428 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 SPZ1Q9BXG8 430 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 ZMYND12Q9H0C1 365 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 HPDP32754 393 aaPredicted RBP13.83□□□□□ -0.19
UBXN4-201ENST00000272638 IFFO1Q0D2I5 559 aa13.83□□□□□ -0.19
UBXN4-201ENST00000272638 COASYQ13057 564 aa13.83□□□□□ -0.19
UBXN4-201ENST00000272638 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.19
UBXN4-201ENST00000272638 COL4A3BPQ9Y5P4 624 aa13.83□□□□□ -0.19
UBXN4-201ENST00000272638 TLDC2A0PJX2 215 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 ZNF543Q08ER8 600 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 NFRKBQ6P4R8 1299 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 UNC13DQ70J99 1090 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 LACRTQ9GZZ8 138 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 ESYT3A0FGR9 886 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 MCM3P25205 808 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 SFR1Q86XK3 245 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 KSR1Q8IVT5 923 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 CCDC127Q96BQ5 260 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 GOLPH3Q9H4A6 298 aa13.83□□□□□ -0.2
UBXN4-201ENST00000272638 HSF2BPO75031 334 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 RPL13P26373 211 aaKnown RBP13.82□□□□□ -0.2
UBXN4-201ENST00000272638 ARHGAP4P98171 946 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 LRCH2Q5VUJ6 765 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 RAD54LQ92698 747 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 MMS19Q96T76 1030 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 CUEDC2Q9H467 287 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 L2HGDHQ9H9P8 463 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 HYOU1Q9Y4L1 999 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 PCDHA13Q9Y5I0 950 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 ECE2O60344 883 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 NPR1P16066 1061 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 VAV2P52735 878 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 BRD3Q15059 726 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 FAM83BQ5T0W9 1011 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 RIN2Q8WYP3 895 aaPredicted RBP13.82□□□□□ -0.2
UBXN4-201ENST00000272638 RABGAP1Q9Y3P9 1069 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 PPP1R2P41236 205 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 DDR1Q08345 913 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 CDKAL1Q5VV42 579 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 GIMAP8Q8ND71 665 aaPredicted RBP13.82□□□□□ -0.2
UBXN4-201ENST00000272638 FAM212AQ96EL1 285 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 CCDC17Q96LX7 622 aa13.82□□□□□ -0.2
UBXN4-201ENST00000272638 TESPA1A2RU30 521 aaPredicted RBP13.81□□□□□ -0.2
UBXN4-201ENST00000272638 RHOBTB3O94955 611 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 ACTN1P12814 892 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 ATP1A2P50993 1020 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 ODR4Q5SWX8 454 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 FAM178BQ8IXR5 827 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 TRIM58Q8NG06 486 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 STK17AQ9UEE5 414 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 BACH1O14867 736 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 CETN1Q12798 172 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 E2F4Q16254 413 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 KCNK18Q7Z418 384 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 TSGA10Q9BZW7 698 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.81□□□□□ -0.2
UBXN4-201ENST00000272638 MYO1AQ9UBC5 1043 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 SWAP70Q9UH65 585 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 PPP4CP60510 307 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 CASP8Q14790 479 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 EXOC3L4Q17RC7 722 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 NAALADL2Q58DX5 795 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 SYDE2Q5VT97 1194 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 JDP2Q8WYK2 163 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 EHMT1Q9H9B1 1298 aa13.81□□□□□ -0.2
UBXN4-201ENST00000272638 MORC2Q9Y6X9 1032 aaPredicted RBP13.81□□□□□ -0.2
UBXN4-201ENST00000272638 CCDC151A5D8V7 595 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 GOLGA6BA6NDN3 693 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 GUCY2DQ02846 1103 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 UHMK1Q8TAS1 419 aaKnown RBP13.8□□□□□ -0.2
UBXN4-201ENST00000272638 DDTLA6NHG4 134 aaPredicted RBP13.8□□□□□ -0.2
UBXN4-201ENST00000272638 N4BP1O75113 896 aaKnown RBP13.8□□□□□ -0.2
UBXN4-201ENST00000272638 GFPT2O94808 682 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 GRB10Q13322 594 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 NPY5RQ15761 445 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 CCDC25Q86WR0 208 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 PNKPQ96T60 521 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 KRT12Q99456 494 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 ZNF277Q9NRM2 450 aaPredicted RBP13.8□□□□□ -0.2
UBXN4-201ENST00000272638 KDM3AQ9Y4C1 1321 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 TM4SF1P30408 202 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 NT5DC1Q5TFE4 455 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 STXBP4Q6ZWJ1 553 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 PHLDB2Q86SQ0 1253 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 CALUO43852 315 aaPredicted RBP13.8□□□□□ -0.2
UBXN4-201ENST00000272638 CFAP58Q5T655 872 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 RNF187Q5TA31 235 aaPredicted RBP13.8□□□□□ -0.2
UBXN4-201ENST00000272638 CYP2W1Q8TAV3 490 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms