RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 VAV2P52735 878 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 FKBP3Q00688 224 aaKnown RBP11.43□□□□□ -0.58
LSG1-201ENST00000265245 EHHADHQ08426 723 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 COASYQ13057 564 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 LRRC41Q15345 812 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 SLFN13Q68D06 897 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 KIAA0825Q8IV33 1275 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 CCDC65Q8IXS2 484 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 PNKPQ96T60 521 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 LACRTQ9GZZ8 138 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 DBNDD1Q9H9R9 158 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 PANK4Q9NVE7 773 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 TFR2Q9UP52 801 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 SIK3Q9Y2K2 1263 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 NRXN2Q9P2S2 1712 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP17L15C9J2P7 530 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP17L13C9JLJ4 530 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP17L11C9JVI0 530 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP17L18D6R9N7 530 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP17L22D6RA61 530 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP17L17D6RBQ6 530 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP17L19D6RCP7 530 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP17L20D6RJB6 530 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 PLSCR1O15162 318 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 EEF2P13639 858 aaKnown RBP11.43□□□□□ -0.58
LSG1-201ENST00000265245 HNRNPH3P31942 346 aaKnown RBP11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP11P51784 963 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 CYP27A1Q02318 531 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 CKAP4Q07065 602 aaKnown RBP11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP17L24Q0WX57 530 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 USP17L6PQ6QN14 398 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 LRRC55Q6ZSA7 311 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 HDXQ7Z353 690 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 NYAP2Q9P242 653 aa11.43□□□□□ -0.58
LSG1-201ENST00000265245 ATF5Q9Y2D1 282 aaPredicted RBP11.43□□□□□ -0.58
LSG1-201ENST00000265245 ANO9A1A5B4 782 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 ATP1A1P05023 1023 aaKnown RBP11.42□□□□□ -0.58
LSG1-201ENST00000265245 OAS2P29728 719 aaKnown RBP11.42□□□□□ -0.58
LSG1-201ENST00000265245 CDC37Q16543 378 aaPredicted RBP11.42□□□□□ -0.58
LSG1-201ENST00000265245 PAPD7Q5XG87 772 aaKnown RBP11.42□□□□□ -0.58
LSG1-201ENST00000265245 CACNA2D4Q7Z3S7 1137 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 ZFPM1Q8IX07 1006 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 ZNF622Q969S3 477 aaKnown RBP eCLIP11.42□□□□□ -0.587e-7■■■□□ 14.8
LSG1-201ENST00000265245 RPGRIP1Q96KN7 1286 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 ANO3Q9BYT9 981 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 IFIH1Q9BYX4 1025 aaKnown RBP11.42□□□□□ -0.58
LSG1-201ENST00000265245 KIAA1024Q9UPX6 916 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 MACROD2A1Z1Q3 448 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 TRAF5O00463 557 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 NKRFO15226 690 aaKnown RBP eCLIP11.42□□□□□ -0.58
LSG1-201ENST00000265245 AKR1B10O60218 316 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 CACNB3P54284 484 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 ECM1Q16610 540 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 CCDC40Q4G0X9 1142 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
LSG1-201ENST00000265245 HYIQ5T013 277 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 SLFN12Q8IYM2 578 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 NOA1Q8NC60 698 aaKnown RBP11.42□□□□□ -0.58
LSG1-201ENST00000265245 NEK11Q8NG66 645 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 GJA10Q969M2 543 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 MKL1Q969V6 931 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 DNAJC19Q96DA6 116 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 DNAJC18Q9H819 358 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 HDAC6Q9UBN7 1215 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 FAM196BA6NMK8 535 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 SLC26A4O43511 780 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 EIF3JO75822 258 aaKnown RBP11.42□□□□□ -0.58
LSG1-201ENST00000265245 MMP10P09238 476 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 ICA1Q05084 483 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 AP3B2Q13367 1082 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 HAUS3Q68CZ6 603 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 MRIQ9BWK5 157 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 UBXN6Q9BZV1 441 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 COL4A3BPQ9Y5P4 624 aa11.42□□□□□ -0.58
LSG1-201ENST00000265245 RCCD1A6NED2 376 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 KRT18P05783 430 aaKnown RBP11.41□□□□□ -0.58
LSG1-201ENST00000265245 PLA2G4BP0C869 781 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 SLURP2P0DP57 97 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 MCM3P25205 808 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 STRIP1Q5VSL9 837 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 MCTP2Q6DN12 878 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 RRAGAQ7L523 313 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 TRIM58Q8NG06 486 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 FOCADQ5VW36 1801 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 MAP2K7O14733 419 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 TACC1O75410 805 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 ERCC3P19447 782 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 KIF11P52732 1056 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 VSNL1P62760 191 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 HDLBPQ00341 1268 aaKnown RBP11.41□□□□□ -0.58
LSG1-201ENST00000265245 IKQ13123 557 aaPredicted RBP11.41□□□□□ -0.58
LSG1-201ENST00000265245 TMEM179Q6ZVK1 233 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 GPBP1Q86WP2 473 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 TXLNBQ8N3L3 684 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 BANK1Q8NDB2 785 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 GLIS3Q8NEA6 775 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 FAM212AQ96EL1 285 aa11.41□□□□□ -0.58
LSG1-201ENST00000265245 IDI2Q9BXS1 227 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms