RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 PNMA8AQ86V59 439 aaPredicted RBP18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 SCYL1Q96KG9 808 aa18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 MAD1L1Q9Y6D9 718 aa18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 CDK12Q9NYV4 1490 aaPredicted RBP18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 TTC37Q6PGP7 1564 aa18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 RFX6Q8HWS3 928 aa18.33■□□□□ 0.52
CROCCP3-201ENST00000263511 SPATA31E1Q6ZUB1 1445 aa18.33■□□□□ 0.52
CROCCP3-201ENST00000263511 SAMD9LQ8IVG5 1584 aa18.33■□□□□ 0.52
CROCCP3-201ENST00000263511 NR5A1Q13285 461 aa18.33■□□□□ 0.52
CROCCP3-201ENST00000263511 BRINP3Q76B58 766 aa18.33■□□□□ 0.52
CROCCP3-201ENST00000263511 EEPD1Q7L9B9 569 aa18.33■□□□□ 0.52
CROCCP3-201ENST00000263511 PI4K2BQ8TCG2 481 aa18.33■□□□□ 0.52
CROCCP3-201ENST00000263511 PARVGQ9HBI0 331 aa18.33■□□□□ 0.52
CROCCP3-201ENST00000263511 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
CROCCP3-201ENST00000263511 MEIS1O00470 390 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 ZNF500O60304 480 aaPredicted RBP18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 TSNAXIP1Q2TAA8 658 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 KIAA1841Q6NSI8 718 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 CAPN12Q6ZSI9 719 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 DGKHQ86XP1 1220 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 ZNF653Q96CK0 615 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 NOC2LQ9Y3T9 749 aaKnown RBP18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 CYP2D7A0A087X1C5 515 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 ZNF233A6NK53 670 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 CASQ2O14958 399 aaPredicted RBP18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 GSTA1P08263 222 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 GSTA2P09210 222 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 PDXDC2PQ6P474 469 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 SPATA31A3Q5VYP0 1347 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 IKBKBO14920 756 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 XPAP23025 273 aaPredicted RBP18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 BRIP1Q9BX63 1249 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 TTBK2Q6IQ55 1244 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 LINC00301Q8NCQ3 95 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 PCIF1Q9H4Z3 704 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 KLHL14Q9P2G3 628 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 MAGI3Q5TCQ9 1506 aa18.32■□□□□ 0.52
CROCCP3-201ENST00000263511 MED7O43513 233 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 SRGAP2BP0DMP2 458 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 TBC1D10BQ4KMP7 808 aaPredicted RBP18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 SLC12A6Q9UHW9 1150 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 ABT1Q9ULW3 272 aaKnown RBP18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 CLIC2O15247 247 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 MAPK4P31152 587 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 MYO1EQ12965 1108 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 PSMD2Q13200 908 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 SURF1Q15526 300 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 GPT2Q8TD30 523 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 ANAPC5Q9UJX4 755 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 EFCAB8A8MWE9 144 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 SATB1Q01826 763 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 TAB3Q8N5C8 712 aaPredicted RBP18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 ZNF341Q9BYN7 854 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 EMILIN3Q9NT22 766 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 C21orf2O43822 256 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 YWHAGP61981 247 aaKnown RBP eCLIP18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 ARHGAP4P98171 946 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 ALCAMQ13740 583 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 UBE2SQ16763 222 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 MYO3BQ8WXR4 1341 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 GOLGA8KD6RF30 607 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 EIF2AK2P19525 551 aaKnown RBP18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 PHLDB2Q86SQ0 1253 aa18.31■□□□□ 0.52
CROCCP3-201ENST00000263511 SASH1O94885 1247 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 NXNQ6DKJ4 435 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 PLA2G4BP0C869 781 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 RC3H1Q5TC82 1133 aaKnown RBP18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 NARFQ9UHQ1 456 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 ATP8B3O60423 1300 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 COBLO75128 1261 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 NAA35Q5VZE5 725 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 TDRD7Q8NHU6 1098 aaKnown RBP18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 ZNF526Q8TF50 670 aaPredicted RBP18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 SLC38A10Q9HBR0 1119 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 RCOR1Q9UKL0 485 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 NCAPD2Q15021 1401 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 MAP3K21Q5TCX8 1036 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 FAM71BQ8TC56 605 aa18.3■□□□□ 0.52
CROCCP3-201ENST00000263511 SAT1P21673 171 aa18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 LRRC4Q9HBW1 653 aa18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 MRPL47Q9HD33 250 aaKnown RBP18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 NXF1Q9UBU9 619 aaKnown RBP18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 SRPRBQ9Y5M8 271 aaKnown RBP18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 MXI1P50539 228 aa18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 RBBP5Q15291 538 aaKnown RBP18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 SMYD4Q8IYR2 804 aaPredicted RBP18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 DCAF4Q8WV16 495 aa18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 SKA2Q8WVK7 121 aaPredicted RBP18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 MAGOHBQ96A72 148 aaKnown RBP18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 SF3A3Q12874 501 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■■■■□ 26.5
CROCCP3-201ENST00000263511 GOLGA8SH3BPF8 625 aa18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 SGK1O00141 431 aa18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 WDR46O15213 610 aaKnown RBP18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 BUB1BO60566 1050 aaPredicted RBP18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 LRRN2O75325 713 aa18.29■□□□□ 0.52
CROCCP3-201ENST00000263511 NAA25Q14CX7 972 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms