RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 KAT2BQ92831 832 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 RIOX1Q9H6W3 641 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 RBM8AQ9Y5S9 174 aaKnown RBP14.14□□□□□ -0.15
TRAF4-202ENST00000262396 CUL9Q8IWT3 2517 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 SGSM2O43147 1006 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 PPP1R11O60927 126 aaPredicted RBP14.13□□□□□ -0.15
TRAF4-202ENST00000262396 F2P00734 622 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 GNAT1P11488 350 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 CKBP12277 381 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 THPOP40225 353 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 SP4Q02446 784 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 NEDD9Q14511 834 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 MYSM1Q5VVJ2 828 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 FAM117BQ6P1L5 589 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 NLRX1Q86UT6 975 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 TMTC2Q8N394 836 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 MTMR8Q96EF0 704 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 ASB2Q96Q27 587 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 LZTS2Q9BRK4 669 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 RTEL1Q9NZ71 1219 aa14.13□□□□□ -0.15
TRAF4-202ENST00000262396 ABHD14A-ACY1A0A1B0GW23 586 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 TNFRSF10AO00220 468 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 RFXAPO00287 272 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 PRC1O43663 620 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 STAM2O75886 525 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 DDAH1O94760 285 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 UBA1P22314 1058 aaKnown RBP14.12□□□□□ -0.15
TRAF4-202ENST00000262396 MCM5P33992 734 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 HSDL1Q3SXM5 330 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 UTP14CQ5TAP6 766 aaKnown RBP14.12□□□□□ -0.15
TRAF4-202ENST00000262396 ZNF654Q8IZM8 581 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 ATP6V0A1Q93050 837 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 ZNF215Q9UL58 517 aaPredicted RBP14.12□□□□□ -0.15
TRAF4-202ENST00000262396 UNC80Q8N2C7 3258 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 EMSYQ7Z589 1322 aa14.12□□□□□ -0.15
TRAF4-202ENST00000262396 RSPH10B2B2RC85 870 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 H3BRB1 525 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 OPLAHO14841 1288 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 FIBPO43427 364 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 AMHP03971 560 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 RSPH10BP0C881 870 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 CALM1P0DP23 149 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 CALM2P0DP24 149 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 CALM3P0DP25 149 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 WDR5P61964 334 aaKnown RBP14.11□□□□□ -0.15
TRAF4-202ENST00000262396 ZNF200P98182 395 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-202ENST00000262396 TROAPQ12815 778 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 CYFIP1Q7L576 1253 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 IL31RAQ8NI17 732 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 MAP4K1Q92918 833 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 UHRF1Q96T88 793 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-202ENST00000262396 MYL10Q9BUA6 226 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 USP26Q9BXU7 913 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 TUT1Q9H6E5 874 aaKnown RBP14.11□□□□□ -0.15
TRAF4-202ENST00000262396 SENP2Q9HC62 589 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 ANO2Q9NQ90 1003 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 SLC12A7Q9Y666 1083 aa14.11□□□□□ -0.15
TRAF4-202ENST00000262396 MYH6P13533 1939 aa14.1□□□□□ -0.15
TRAF4-202ENST00000262396 LGR5O75473 907 aa14.1□□□□□ -0.15
TRAF4-202ENST00000262396 GHRHRQ02643 423 aa14.1□□□□□ -0.15
TRAF4-202ENST00000262396 ZNF618Q5T7W0 954 aa14.1□□□□□ -0.15
TRAF4-202ENST00000262396 ADAMTS19Q8TE59 1207 aa14.1□□□□□ -0.15
TRAF4-202ENST00000262396 TMEM87BQ96K49 555 aa14.1□□□□□ -0.15
TRAF4-202ENST00000262396 EHMT1Q9H9B1 1298 aa14.1□□□□□ -0.15
TRAF4-202ENST00000262396 MTUS1Q9ULD2 1270 aa14.1□□□□□ -0.15
TRAF4-202ENST00000262396 SCN10AQ9Y5Y9 1956 aa14.1□□□□□ -0.15
TRAF4-202ENST00000262396 MYO9BQ13459 2157 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 SPDYE3A6NKU9 549 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 HAS3O00219 553 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 CYTH3O43739 400 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 RGS20O76081 388 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 LGALS2P05162 132 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 SMIM10L2AP0DMW4 78 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 SMIM10L2BP0DMW5 78 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 SP2Q02086 613 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 TAP1Q03518 808 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 RNF20Q5VTR2 975 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 XRRA1Q6P2D8 792 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 USP17L6PQ6QN14 398 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 METTL7BQ6UX53 244 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 TMCO2Q7Z6W1 182 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-202ENST00000262396 MB21D2Q8IYB1 491 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-202ENST00000262396 MYOCDQ8IZQ8 938 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 CCDC82Q8N4S0 544 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 GIMAP8Q8ND71 665 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-202ENST00000262396 IGDCC4Q8TDY8 1250 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 SEPT8Q92599 483 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 DHX38Q92620 1227 aaKnown RBP14.09□□□□□ -0.15
TRAF4-202ENST00000262396 GPKOWQ92917 476 aaPredicted RBP eCLIP14.09□□□□□ -0.15
TRAF4-202ENST00000262396 CDHR1Q96JP9 859 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 MAP3K14Q99558 947 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 RAD9AQ99638 391 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 SPZ1Q9BXG8 430 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 PSTPIP2Q9H939 334 aa14.09□□□□□ -0.15
TRAF4-202ENST00000262396 NAP1L2Q9ULW6 460 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-202ENST00000262396 NBNO60934 754 aa14.08□□□□□ -0.16
TRAF4-202ENST00000262396 CTSHP09668 335 aa14.08□□□□□ -0.16
TRAF4-202ENST00000262396 RXRAP19793 462 aa14.08□□□□□ -0.16
TRAF4-202ENST00000262396 ANTXR2P58335 489 aa14.08□□□□□ -0.16
TRAF4-202ENST00000262396 DEFB103AP81534 67 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms