RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 TEKT1Q969V4 418 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 NUDT16Q96DE0 195 aaKnown RBP9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 TTC25Q96NG3 672 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 LZTS2Q9BRK4 669 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 DPH5Q9H2P9 285 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 GID8Q9NWU2 228 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 CD2APQ9Y5K6 639 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 CHL1O00533 1208 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 SERPINI2O75830 405 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 ARMCX6Q7L4S7 300 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 DYDC2Q96IM9 177 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 CCDC138Q96M89 665 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 MTMR7Q9Y216 660 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 ATP8A1Q9Y2Q0 1164 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 RPN1P04843 607 aaKnown RBP9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 PAX7P23759 505 aa9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 ANXA13P27216 316 aa9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 CCDC82Q8N4S0 544 aa9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 NAF1Q96HR8 494 aaKnown RBP9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 EPSTI1Q96J88 318 aa9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 CRNKL1Q9BZJ0 848 aaKnown RBP9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 FTOQ9C0B1 505 aaKnown RBP eCLIP9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 SH2D4AQ9H788 454 aa9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 MCM8Q9UJA3 840 aa9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 RFX7Q2KHR2 1363 aa9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 CARMIL3Q8ND23 1372 aa9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 ADAMTS13Q76LX8 1427 aa9.02□□□□□ -0.96
SNCAIP-201ENST00000261367 ATP7BP35670 1465 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 ANP32DO95626 131 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 ATP6V1G2O95670 118 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 GGPS1O95749 300 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 PARP1P09874 1014 aaKnown RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 MAGOHP61326 146 aaKnown RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 SKOR1P84550 965 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 ASPHQ12797 758 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 RARS2Q5T160 578 aaKnown RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 IRGCQ6NXR0 463 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 MAGOHBQ96A72 148 aaKnown RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 XPO6Q96QU8 1125 aaKnown RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 PSMB7Q99436 277 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 CCDC22O60826 627 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 PDE5AO76074 875 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 FAM13AO94988 1023 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 ECEL1O95672 775 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 KRT3P12035 628 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 MYL6BP14649 208 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 SERPINB3P29508 390 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 ADCY8P40145 1251 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 RNASE9P60153 205 aaKnown RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 KRR1Q13601 381 aaKnown RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 MAN2A1Q16706 1144 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 HAUS3Q68CZ6 603 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 PDXDC1Q6P996 788 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 ZKSCAN4Q969J2 545 aaPredicted RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 TUBGCP2Q9BSJ2 902 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 EMILIN1Q9Y6C2 1016 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 TTI1O43156 1089 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 FAM200BP0CF97 657 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 NQO1P15559 274 aaKnown RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 FMR1NBQ8N0W7 255 aaPredicted RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 NSUN7Q8NE18 718 aaKnown RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 C17orf50Q8WW18 174 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 APPBP2Q92624 585 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 LSM14BQ9BX40 385 aaKnown RBP9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 MID2Q9UJV3 735 aa9.02□□□□□ -0.97
SNCAIP-201ENST00000261367 KDM3AQ9Y4C1 1321 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 LDHCP07864 332 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 SCTRP47872 440 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 VPS41P49754 854 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 COPS2P61201 443 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 DR1Q01658 176 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 EHHADHQ08426 723 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 ARID5BQ14865 1188 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 TBCCQ15814 346 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 UAP1Q16222 522 aaPredicted RBP9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 PALM2Q8IXS6 379 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 ABTB2Q8N961 1025 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 CLMNQ96JQ2 1002 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 ROPN1BQ9BZX4 212 aaPredicted RBP9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 ROPN1Q9HAT0 212 aaPredicted RBP9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 LCMT1Q9UIC8 334 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 MIF4GDA9UHW6 222 aaKnown RBP9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 E7EWF7 191 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 Q4G0T1 1027 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 RESP18Q5W5W9 173 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 TMED8Q6PL24 325 aaPredicted RBP9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 RBM43Q6ZSC3 357 aaKnown RBP9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 TRIM11Q96F44 468 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 ABCF2Q9UG63 623 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 RPL26L1Q9UNX3 145 aaKnown RBP9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 TSPY2A6NKD2 308 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 MAP2K7O14733 419 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 ZMYND10O75800 440 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 MARK3P27448 753 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 DHX34Q14147 1143 aaKnown RBP9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 NDUFA5Q16718 116 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 WASHC2DQ5SRD0 308 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 MB21D1Q8N884 522 aa9.01□□□□□ -0.97
SNCAIP-201ENST00000261367 CCDC89Q8N998 374 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms