RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PPP6R2O75170 966 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 CD58P19256 250 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 HOXA13P31271 388 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-201ENST00000261037 TFAMQ00059 246 aaKnown RBP13.15□□□□□ -0.3
COL8A1-201ENST00000261037 TMED2Q15363 201 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 USP17L1Q7RTZ2 530 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 MYLK4Q86YV6 388 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-201ENST00000261037 ACRBPQ8NEB7 543 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 FBXO18Q8NFZ0 1043 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 FAM149B1Q96BN6 582 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 CEP170P1Q96L14 293 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 UBE2TQ9NPD8 197 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-201ENST00000261037 SYNMO15061 1565 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 MARK3P27448 753 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 ABI1Q8IZP0 508 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 MAGOHBQ96A72 148 aaKnown RBP13.15□□□□□ -0.3
COL8A1-201ENST00000261037 CFAP36Q96G28 342 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 SLC38A10Q9HBR0 1119 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 NXF1Q9UBU9 619 aaKnown RBP13.15□□□□□ -0.3
COL8A1-201ENST00000261037 INHBAP08476 426 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 LIG3P49916 1009 aa13.15□□□□□ -0.3
COL8A1-201ENST00000261037 TET3O43151 1660 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 SOWAHDA6NJG2 315 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 FOSP01100 380 aaPredicted RBP13.14□□□□□ -0.31
COL8A1-201ENST00000261037 PDE1BQ01064 536 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 C7orf31Q8N865 590 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 GBP5Q96PP8 586 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 CDC42BPAQ5VT25 1732 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 ATP7BP35670 1465 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 GOLGA8IPA6NC78 632 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 GOLGA8JA6NMD2 632 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 MYO1FO00160 1098 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 SLC39A14Q15043 492 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 MRFAP1L1Q96HT8 127 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 IPO11Q9UI26 975 aaKnown RBP13.14□□□□□ -0.31
COL8A1-201ENST00000261037 LRFN2Q9ULH4 789 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 ABCC12Q96J65 1359 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 AOC3Q16853 763 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 RSRC2Q7L4I2 434 aaKnown RBP13.14□□□□□ -0.31
COL8A1-201ENST00000261037 DACT3Q96B18 629 aaPredicted RBP13.14□□□□□ -0.31
COL8A1-201ENST00000261037 GCNT4Q9P109 453 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 LEMD3Q9Y2U8 911 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
COL8A1-201ENST00000261037 CCDC93Q567U6 631 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 BCAS4Q8TDM0 211 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 PARD3BQ8TEW8 1205 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 CDKL2Q92772 493 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 ATP6V0A1Q93050 837 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 MIS12Q9H081 205 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 SRP68Q9UHB9 627 aaKnown RBP13.14□□□□□ -0.31
COL8A1-201ENST00000261037 CLTAP09496 248 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 CTTNQ14247 550 aaKnown RBP13.14□□□□□ -0.31
COL8A1-201ENST00000261037 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
COL8A1-201ENST00000261037 AP5M1Q9H0R1 490 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 BCAP29Q9UHQ4 241 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 ANGPTL3Q9Y5C1 460 aa13.14□□□□□ -0.31
COL8A1-201ENST00000261037 FRMD3A2A2Y4 597 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 STAT2P52630 851 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 RNASELQ05823 741 aaKnown RBP13.13□□□□□ -0.31
COL8A1-201ENST00000261037 TMTC4Q5T4D3 741 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 RETREG2Q8NC44 543 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 PDZD8Q8NEN9 1154 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 SLC7A3Q8WY07 619 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 SPDL1Q96EA4 605 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 EPB41L5Q9HCM4 733 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 SH2B2O14492 632 aaPredicted RBP13.13□□□□□ -0.31
COL8A1-201ENST00000261037 MMP1P03956 469 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
COL8A1-201ENST00000261037 ZKSCAN8Q15776 578 aaPredicted RBP13.13□□□□□ -0.31
COL8A1-201ENST00000261037 DBN1Q16643 649 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 SGO2Q562F6 1265 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 CYP4F22Q6NT55 531 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 METTL23Q86XA0 190 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 TMEM94Q12767 1356 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 PFDN6O15212 129 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 NLGN1Q8N2Q7 840 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 ABCC3O15438 1527 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 PRDM15P57071 1507 aaPredicted RBP13.13□□□□□ -0.31
COL8A1-201ENST00000261037 LAD1O00515 517 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 CPP00450 1065 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 BMP3P12645 472 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 GAP43P17677 238 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 ETF1P62495 437 aaKnown RBP13.13□□□□□ -0.31
COL8A1-201ENST00000261037 GPATCH4Q5T3I0 446 aaKnown RBP13.13□□□□□ -0.31
COL8A1-201ENST00000261037 MAP7D3Q8IWC1 876 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 BBOF1Q8ND07 529 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 RNF26Q9BY78 433 aaPredicted RBP13.13□□□□□ -0.31
COL8A1-201ENST00000261037 SAMSN1Q9NSI8 373 aaKnown RBP13.13□□□□□ -0.31
COL8A1-201ENST00000261037 SPTLC3Q9NUV7 552 aa13.13□□□□□ -0.31
COL8A1-201ENST00000261037 LARGE1O95461 756 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 PLTPP55058 493 aa13.12□□□□□ -0.31
COL8A1-201ENST00000261037 KIF23Q02241 960 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 DARS2Q6PI48 645 aaKnown RBP13.12□□□□□ -0.31
COL8A1-201ENST00000261037 KCTD6Q8NC69 237 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms