RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 UTRNP46939 3433 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 HIP1RO75146 1068 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 SRGNP10124 158 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 CTSWP56202 376 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 TAF11Q15544 211 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 CAPRIN2Q6IMN6 1127 aaKnown RBP13.5□□□□□ -0.25
USP30-201ENST00000257548 INTS8Q75QN2 995 aaKnown RBP13.5□□□□□ -0.25
USP30-201ENST00000257548 RDH13Q8NBN7 331 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 MIEF2Q96C03 454 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 DHTKD1Q96HY7 919 aaPredicted RBP13.5□□□□□ -0.25
USP30-201ENST00000257548 ATP2C1P98194 919 aaPredicted RBP13.49□□□□□ -0.25
USP30-201ENST00000257548 TAOK3Q9H2K8 898 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 TAF1DQ9H5J8 278 aaPredicted RBP13.49□□□□□ -0.25
USP30-201ENST00000257548 NOD2Q9HC29 1040 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.49□□□□□ -0.25
USP30-201ENST00000257548 DDX20Q9UHI6 824 aaKnown RBP13.49□□□□□ -0.25
USP30-201ENST00000257548 EVI5O60447 810 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 HLFQ16534 295 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 ARHGAP44Q17R89 818 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 NT5DC1Q5TFE4 455 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 CCDC105Q8IYK2 499 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 FUKQ8N0W3 1084 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 MMGT1Q8N4V1 131 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 PNMA1Q8ND90 353 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 ARMC2Q8NEN0 867 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 TMEM60Q9H2L4 133 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 FER1L4A9Z1Z3 1794 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 FGGP02679 453 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 SCTRP47872 440 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 POLE2P56282 527 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 SATB1Q01826 763 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 MTMR3Q13615 1198 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 MAN2A1Q16706 1144 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 FAM47EQ6ZV65 393 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 ARHGEF2Q92974 986 aaKnown RBP13.49□□□□□ -0.25
USP30-201ENST00000257548 FMO2Q99518 471 aa13.49□□□□□ -0.25
USP30-201ENST00000257548 TTI1O43156 1089 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 HSD17B3P37058 310 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
USP30-201ENST00000257548 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 TRIM51Q9BSJ1 452 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 ADAM33Q9BZ11 813 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 MTRF1LQ9UGC7 380 aaKnown RBP13.48□□□□□ -0.25
USP30-201ENST00000257548 A0A1W2PQC6 194 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 SMCO2A6NFE2 343 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 PGRMC1O00264 195 aaKnown RBP13.48□□□□□ -0.25
USP30-201ENST00000257548 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
USP30-201ENST00000257548 CYP2D6P10635 497 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
USP30-201ENST00000257548 IFT74Q96LB3 600 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 PSMD1Q99460 953 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 PACSIN1Q9BY11 444 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 C6orf50Q9HD87 102 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 STK36Q9NRP7 1315 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 FOXP2O15409 715 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 PRPF3O43395 683 aaKnown RBP13.48□□□□□ -0.25
USP30-201ENST00000257548 OR52Z1P0C646 297 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 ZNF449Q6P9G9 518 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 RAPGEF5Q92565 580 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 CHMP6Q96FZ7 201 aa13.48□□□□□ -0.25
USP30-201ENST00000257548 RFX7Q2KHR2 1363 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 EPHB6O15197 1021 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 TRIM37O94972 964 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 ACSL3O95573 720 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 CALCOCO2Q13137 446 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 NONOQ15233 471 aaKnown RBP eCLIP13.47□□□□□ -0.25
USP30-201ENST00000257548 FAM83BQ5T0W9 1011 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 APTXQ7Z2E3 356 aaKnown RBP13.47□□□□□ -0.25
USP30-201ENST00000257548 MYOCDQ8IZQ8 938 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 LMBR1Q8WVP7 490 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 RPGRQ92834 1020 aaKnown RBP13.47□□□□□ -0.25
USP30-201ENST00000257548 ASAP1Q9ULH1 1129 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 MEGF6O75095 1541 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 STX2P32856 288 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 ZNF131P52739 623 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 ACCSLQ4AC99 568 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 KDM7AQ6ZMT4 941 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 NOP53Q9NZM5 478 aaKnown RBP13.47□□□□□ -0.25
USP30-201ENST00000257548 FMN2Q9NZ56 1722 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
USP30-201ENST00000257548 POTEMA6NI47 508 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 ANP32DO95626 131 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 RBBP5Q15291 538 aaKnown RBP13.47□□□□□ -0.25
USP30-201ENST00000257548 QPCTQ16769 361 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 PRMT1Q99873 361 aaKnown RBP13.47□□□□□ -0.25
USP30-201ENST00000257548 TLR10Q9BXR5 811 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 ASIC3Q9UHC3 531 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 RASAL2Q9UJF2 1139 aa13.47□□□□□ -0.25
USP30-201ENST00000257548 NIP7Q9Y221 180 aaKnown RBP eCLIP13.47□□□□□ -0.25
USP30-201ENST00000257548 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
USP30-201ENST00000257548 NCAPD2Q15021 1401 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 CETN3O15182 167 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 CPP00450 1065 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 PBX1P40424 430 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 ZBTB16Q05516 673 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 ADAM9Q13443 819 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 SETDB1Q15047 1291 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 CALCRLQ16602 461 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms