RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 SLC40A1Q9NP59 571 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 ROBO2Q9HCK4 1378 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 hCG_1642624A0A1W2PR95 340 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 MAN1A2O60476 641 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 PPP1R37O75864 691 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 CFBP00751 764 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 PPP2R2AP63151 447 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 NLRX1Q86UT6 975 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 RIN2Q8WYP3 895 aaPredicted RBP11.87□□□□□ -0.51
DCLK1-201ENST00000255448 EAF2Q96CJ1 260 aaPredicted RBP11.87□□□□□ -0.51
DCLK1-201ENST00000255448 TUBGCP2Q9BSJ2 902 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 ZMYND12Q9H0C1 365 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 SLC5A4Q9NY91 659 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 THRAP3Q9Y2W1 955 aaKnown RBP11.87□□□□□ -0.51
DCLK1-201ENST00000255448 EEF1B2P24534 225 aaKnown RBP11.87□□□□□ -0.51
DCLK1-201ENST00000255448 PPP2R5DQ14738 602 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 IFNL3Q8IZI9 196 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 STAMBPL1Q96FJ0 436 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 CCT8L2Q96SF2 557 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 LEMD3Q9Y2U8 911 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 TMEM232C9JQI7 657 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 HARSP12081 509 aaKnown RBP11.87□□□□□ -0.51
DCLK1-201ENST00000255448 TMED10P49755 219 aaKnown RBP11.87□□□□□ -0.51
DCLK1-201ENST00000255448 USP14P54578 494 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 C6orf118Q5T5N4 469 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 FAM47EQ6ZV65 393 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 SPZ1Q9BXG8 430 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 LSG1Q9H089 658 aaKnown RBP11.87□□□□□ -0.51
DCLK1-201ENST00000255448 EPN3Q9H201 632 aa11.87□□□□□ -0.51
DCLK1-201ENST00000255448 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 XDHP47989 1333 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 WDR91A4D1P6 747 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 CHRNDQ07001 517 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 SLC39A14Q15043 492 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 UBE3CQ15386 1083 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 USPL1Q5W0Q7 1092 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 KDM3AQ9Y4C1 1321 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 SKAP2O75563 359 aaPredicted RBP11.86□□□□□ -0.51
DCLK1-201ENST00000255448 DCTN3O75935 186 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 ATP5HO75947 161 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 PABPC4Q13310 644 aaKnown RBP eCLIP11.86□□□□□ -0.51
DCLK1-201ENST00000255448 SLC44A4Q53GD3 710 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 CYP4F22Q6NT55 531 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 KRT27Q7Z3Y8 459 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 CABP7Q86V35 215 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 ENOX1Q8TC92 643 aaKnown RBP11.86□□□□□ -0.51
DCLK1-201ENST00000255448 ATP6V1G3Q96LB4 118 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 NHEJ1Q9H9Q4 299 aaPredicted RBP11.86□□□□□ -0.51
DCLK1-201ENST00000255448 VPS54Q9P1Q0 977 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 A0A0D9SFI3 127 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 LARGE1O95461 756 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 PAX7P23759 505 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 GYG1P46976 350 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 CHMP6Q96FZ7 201 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 CCDC138Q96M89 665 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 ZSCAN10Q96SZ4 725 aaPredicted RBP11.86□□□□□ -0.51
DCLK1-201ENST00000255448 AP1M1Q9BXS5 423 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 POLD4Q9HCU8 107 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 MAN1B1Q9UKM7 699 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 ZDHHC9Q9Y397 364 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 ARHGAP10A1A4S6 786 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 KDM1AO60341 852 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 PDE8BO95263 885 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 IRAK1P51617 712 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 PPP2R5CQ13362 524 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 USH1GQ495M9 461 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 GALNT17Q6IS24 598 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 KIAA2013Q8IYS2 634 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.86□□□□□ -0.51
DCLK1-201ENST00000255448 KIFC2Q96AC6 838 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 ERBB3P21860 1342 aa11.86□□□□□ -0.51
DCLK1-201ENST00000255448 N4BP1O75113 896 aaKnown RBP11.85□□□□□ -0.51
DCLK1-201ENST00000255448 PSMD7P51665 324 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 GRAMD1CQ8IYS0 662 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 SH2D3CQ8N5H7 860 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 PREX2Q70Z35 1606 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 ZNF804BA4D1E1 1349 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 MFAP3LO75121 409 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 RPN1P04843 607 aaKnown RBP11.85□□□□□ -0.51
DCLK1-201ENST00000255448 CUL1Q13616 776 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 NBPF20Q3BBV1 942 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 SYT2Q8N9I0 419 aaPredicted RBP11.85□□□□□ -0.51
DCLK1-201ENST00000255448 SMCR8Q8TEV9 937 aaPredicted RBP11.85□□□□□ -0.51
DCLK1-201ENST00000255448 NSMCE1Q8WV22 266 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 EDC3Q96F86 508 aaKnown RBP11.85□□□□□ -0.51
DCLK1-201ENST00000255448 LRGUKQ96M69 825 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
DCLK1-201ENST00000255448 SKOR1P84550 965 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 FAM47AQ5JRC9 791 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 GGT7Q9UJ14 662 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 SHROOM2Q13796 1616 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 ESYT3A0FGR9 886 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 GTPBP6O43824 516 aaPredicted RBP11.85□□□□□ -0.51
DCLK1-201ENST00000255448 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
DCLK1-201ENST00000255448 ARMCX5Q6P1M9 558 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 LINC00301Q8NCQ3 95 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 PLEKHF1Q96S99 279 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 TTC1Q99614 292 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 BTBD18B2RXH4 712 aa11.85□□□□□ -0.51
DCLK1-201ENST00000255448 CTCFP49711 727 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms