RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 KCNJ18B7U540 433 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 PSMA7O14818 248 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 N4BP3O15049 544 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 TEX33O43247 280 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 PPP1R11O60927 126 aaPredicted RBP12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 FLOT1O75955 427 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 RHOBTB3O94955 611 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 TAL1P17542 331 aaPredicted RBP12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 PPP1R2P41236 205 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 KCNJ12Q14500 433 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 CDC37Q16543 378 aaPredicted RBP12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 ADSSL1Q8N142 457 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 CHURC1Q8WUH1 139 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 TSC1Q92574 1164 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 MTMR8Q96EF0 704 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 MS4A4AQ96JQ5 239 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 PANX2Q96RD6 677 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 NAP1L4Q99733 375 aaKnown RBP12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 LRWD1Q9UFC0 647 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.76□□□□□ -0.372e-7■■□□□ 12.4
CLUHP3-201ENST00000254109 LOC285556D6RIA3 1793 aa12.76□□□□□ -0.37
CLUHP3-201ENST00000254109 ITIH6Q6UXX5 1313 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 LRRC10BA6NIK2 292 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 FXR2P51116 673 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 SNAPC2Q13487 334 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 KRT31Q15323 416 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 QRICH1Q2TAL8 776 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 TCP11X2Q5H9J9 407 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 RGMBQ6NW40 437 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 CATSPERGQ6ZRH7 1159 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 FAM160B2Q86V87 743 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 RASAL3Q86YV0 1011 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 CREBRFQ8IUR6 639 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 TMEM139Q8IV31 216 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 DHTKD1Q96HY7 919 aaPredicted RBP12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 CDK5RAP3Q96JB5 506 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 MTMR9Q96QG7 549 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 C7orf25Q9BPX7 421 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 SLF1Q9BQI6 1058 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 NAA15Q9BXJ9 866 aaKnown RBP12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 PSTPIP2Q9H939 334 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 EXOC1Q9NV70 894 aa12.75□□□□□ -0.37
CLUHP3-201ENST00000254109 KLRC4O43908 158 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 PLA2G6O60733 806 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 COBLO75128 1261 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 CCT6AP40227 531 aaKnown RBP12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 PBX1P40424 430 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 PDIA5Q14554 519 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 PPP4R3AQ6IN85 833 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 GPAT2Q6NUI2 795 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 CCDC174Q6PII3 467 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 SYT10Q6XYQ8 523 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 CNGA4Q8IV77 575 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 PROCA1Q8NCQ7 364 aaPredicted RBP12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 GIMAP8Q8ND71 665 aaPredicted RBP12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 NOC3LQ8WTT2 800 aaKnown RBP12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 ATG4CQ96DT6 458 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 MAGEC2Q9UBF1 373 aaPredicted RBP12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 PPP1R9AQ9ULJ8 1098 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 PPP2R2CQ9Y2T4 447 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 USP17L15C9J2P7 530 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 USP17L13C9JLJ4 530 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 USP17L11C9JVI0 530 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 USP17L18D6R9N7 530 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 USP17L22D6RA61 530 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 USP17L17D6RBQ6 530 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 USP17L19D6RCP7 530 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 USP17L20D6RJB6 530 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 MARCH6O60337 910 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 GCFC2P16383 781 aaKnown RBP12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 CLK2P49760 499 aaKnown RBP12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 COPB1P53618 953 aaKnown RBP12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 ETF1P62495 437 aaKnown RBP12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 ASIC1P78348 528 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 PDE4DQ08499 809 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 RBL2Q08999 1139 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 USP17L24Q0WX57 530 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 SV2BQ7L1I2 683 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 PRPF38AQ8NAV1 312 aaKnown RBP12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 CCDC51Q96ER9 411 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 TRIM9Q9C026 710 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 LRRC27Q9C0I9 530 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 VPS16Q9H269 839 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 THAP9Q9H5L6 903 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 STK17AQ9UEE5 414 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 AGTPBP1Q9UPW5 1226 aa12.74□□□□□ -0.37
CLUHP3-201ENST00000254109 PHLPP2Q6ZVD8 1323 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 COL11A1P12107 1806 aaPredicted RBP12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 CCL15-CCL14A0A0B4J2E2 113 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 BICDL2A1A5D9 508 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 SLC37A4O43826 429 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 PEX10O60683 326 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 TDP2O95551 362 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 ZBTB48P10074 688 aaPredicted RBP12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 DSG3P32926 999 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 GTF2A2P52657 109 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 GRM1Q13255 1194 aa12.73□□□□□ -0.37
CLUHP3-201ENST00000254109 TRIM14Q14142 442 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms