RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SEC31AO94979 1220 aaKnown RBP4.59□□□□□ -1.68
UBE4A-201ENST00000252108 USP17L8P0C7I0 530 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 SHMT1P34896 483 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 HOXD13P35453 343 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 ZBED6P86452 979 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 MAP3K10Q02779 954 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 GOLGA8FQ08AF8 430 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 GOLGA8DPQ0D2H9 430 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 PTGDRQ13258 359 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 C10orf76Q5T2E6 689 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 HGSNATQ68CP4 663 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 TATDN1Q6P1N9 297 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 SH3BP5LQ7L8J4 393 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 CCDC26Q8TAB7 109 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 WHAMMQ8TF30 809 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 ACSBG1Q96GR2 724 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 BORCS6Q96GS4 357 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 TRERF1Q96PN7 1200 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 CRNKL1Q9BZJ0 848 aaKnown RBP4.59□□□□□ -1.68
UBE4A-201ENST00000252108 RASAL2Q9UJF2 1139 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 FAN1Q9Y2M0 1017 aa4.59□□□□□ -1.68
UBE4A-201ENST00000252108 ANK1P16157 1881 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 A0A1W2PQJ5 194 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 RCCD1A6NED2 376 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 CLGNO14967 610 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 TRIM37O94972 964 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 CORO7P57737 925 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 LMNB2Q03252 620 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 TBC1D8BQ0IIM8 1120 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 GRB10Q13322 594 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 KRT31Q15323 416 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SPECC1Q5M775 1068 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 EPM2AIP1Q7L775 607 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 BAP1Q92560 729 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 FIZ1Q96SL8 496 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 NYXQ9GZU5 481 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 ABCB6Q9NP58 842 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SUGT1Q9Y2Z0 365 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 PSMD14O00487 310 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 NDUFA10O95299 355 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 GNA11P29992 359 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 MAP2K2P36507 400 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 RBL2Q08999 1139 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 PAPD7Q5XG87 772 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 HOOK3Q86VS8 718 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 CABS1Q96KC9 395 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 ERGIC2Q96RQ1 377 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 CABP5Q9NP86 173 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 GEMIN8Q9NWZ8 242 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 FRMPD4Q14CM0 1322 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 ATXN2Q99700 1313 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 HMGB1P1B2RPK0 211 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 EIF3CLB5ME19 914 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 PRLRP16471 622 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 AARSP49588 968 aaKnown RBP eCLIP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 PLCB4Q15147 1175 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 RNF187Q5TA31 235 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 TRAPPC11Q7Z392 1133 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SUGP1Q8IWZ8 645 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 RNF10Q8N5U6 811 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 COG1Q8WTW3 980 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 ZBED3Q96IU2 234 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 EIF3CQ99613 913 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 GLT8D2Q9H1C3 349 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 KCNMB3Q9NPA1 279 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SEC63Q9UGP8 760 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 NOL4O94818 638 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 LDHCP07864 332 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SRGNP10124 158 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 MYBP10242 640 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 ATP5DP30049 168 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 HIBADHP31937 336 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 KCNQ4P56696 695 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 TCP11X2Q5H9J9 407 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 BEND6Q5SZJ8 279 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 KRT25Q7Z3Z0 450 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 KCNN1Q92952 543 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 DRC1Q96MC2 740 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 KAT14Q9H8E8 782 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 CD209Q9NNX6 404 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 ABHD10Q9NUJ1 306 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 GRID2IPA4D2P6 1211 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SLC26A4O43511 780 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 JAG1P78504 1218 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SEPT2Q15019 361 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SLC9C1Q4G0N8 1177 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 APOBEC3HQ6NTF7 200 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SYCE1Q8N0S2 351 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 TBC1D16Q8TBP0 767 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 RSRC1Q96IZ7 334 aaKnown RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 NCAPGQ9BPX3 1015 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SLF1Q9BQI6 1058 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 TRIM9Q9C026 710 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 TANGO6Q9C0B7 1094 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 SEMA6BQ9H3T3 888 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 L1RE1Q9UN81 338 aa4.58□□□□□ -1.68
UBE4A-201ENST00000252108 V9GY48 417 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-201ENST00000252108 KAT6BQ8WYB5 2073 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 LGALS16A8MUM7 142 aa4.57□□□□□ -1.68
UBE4A-201ENST00000252108 PDHBP11177 359 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms