RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ZNF662Q6ZS27 426 aa24.36■■□□□ 1.49
RNF39-201ENST00000244360 MSL3Q8N5Y2 521 aaKnown RBP24.36■■□□□ 1.49
RNF39-201ENST00000244360 GJA10Q969M2 543 aa24.36■■□□□ 1.49
RNF39-201ENST00000244360 AMNQ9BXJ7 453 aa24.36■■□□□ 1.49
RNF39-201ENST00000244360 TDRD3Q9H7E2 651 aaKnown RBP24.36■■□□□ 1.49
RNF39-201ENST00000244360 MARCH6O60337 910 aa24.35■■□□□ 1.49
RNF39-201ENST00000244360 GDF11O95390 407 aa24.35■■□□□ 1.49
RNF39-201ENST00000244360 ABL1P00519 1130 aa24.35■■□□□ 1.49
RNF39-201ENST00000244360 TRIM21P19474 475 aaKnown RBP24.35■■□□□ 1.49
RNF39-201ENST00000244360 LRRC55Q6ZSA7 311 aa24.35■■□□□ 1.49
RNF39-201ENST00000244360 ZNF219Q9P2Y4 722 aaPredicted RBP24.35■■□□□ 1.49
RNF39-201ENST00000244360 NKRFO15226 690 aaKnown RBP eCLIP24.35■■□□□ 1.49
RNF39-201ENST00000244360 RAD21O60216 631 aa24.35■■□□□ 1.49
RNF39-201ENST00000244360 IDEP14735 1019 aa24.35■■□□□ 1.49
RNF39-201ENST00000244360 FKBP15Q5T1M5 1219 aa24.35■■□□□ 1.49
RNF39-201ENST00000244360 BTNL9Q6UXG8 535 aa24.35■■□□□ 1.49
RNF39-201ENST00000244360 SUPT20HQ8NEM7 779 aa24.35■■□□□ 1.49
RNF39-201ENST00000244360 AGPAT5Q9NUQ2 364 aa24.35■■□□□ 1.49
RNF39-201ENST00000244360 KLK7P49862 253 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 JAG1P78504 1218 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 CDK17Q00537 523 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 COASYQ13057 564 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 GPS2Q13227 327 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 SLFN12Q8IYM2 578 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 P2RX7Q99572 595 aaKnown RBP24.34■■□□□ 1.49
RNF39-201ENST00000244360 MAP2K7O14733 419 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 VWA3BQ502W6 1294 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 SYDE2Q5VT97 1194 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 GBP3Q9H0R5 595 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 ANKZF1Q9H8Y5 726 aa24.34■■□□□ 1.49
RNF39-201ENST00000244360 YDJCA8MPS7 323 aa24.33■■□□□ 1.49
RNF39-201ENST00000244360 ARHGAP4P98171 946 aa24.33■■□□□ 1.49
RNF39-201ENST00000244360 MAN2A1Q16706 1144 aa24.33■■□□□ 1.49
RNF39-201ENST00000244360 ZCWPW2Q504Y3 356 aa24.33■■□□□ 1.49
RNF39-201ENST00000244360 ETNPPLQ8TBG4 499 aa24.33■■□□□ 1.49
RNF39-201ENST00000244360 HAUS4Q9H6D7 363 aa24.33■■□□□ 1.49
RNF39-201ENST00000244360 PUF60Q9UHX1 559 aaKnown RBP24.33■■□□□ 1.49
RNF39-201ENST00000244360 SIK3Q9Y2K2 1263 aa24.33■■□□□ 1.49
RNF39-201ENST00000244360 CTAGE15A4D2H0 777 aa24.33■■□□□ 1.48
RNF39-201ENST00000244360 TBX3O15119 743 aa24.33■■□□□ 1.48
RNF39-201ENST00000244360 CTAGE8P0CG41 777 aa24.33■■□□□ 1.48
RNF39-201ENST00000244360 HERVK_113P62684 666 aa24.33■■□□□ 1.48
RNF39-201ENST00000244360 CTAGE6Q86UF2 777 aa24.33■■□□□ 1.48
RNF39-201ENST00000244360 FBXO11Q86XK2 927 aa24.33■■□□□ 1.48
RNF39-201ENST00000244360 CTAGE4Q8IX94 777 aa24.33■■□□□ 1.48
RNF39-201ENST00000244360 CCDC170Q8IYT3 715 aa24.33■■□□□ 1.48
RNF39-201ENST00000244360 TXLNBQ8N3L3 684 aa24.33■■□□□ 1.48
RNF39-201ENST00000244360 PRMT6Q96LA8 375 aaPredicted RBP24.33■■□□□ 1.48
RNF39-201ENST00000244360 PSME4Q14997 1843 aa24.32■■□□□ 1.48
RNF39-201ENST00000244360 POLR3GO15318 223 aaPredicted RBP24.32■■□□□ 1.48
RNF39-201ENST00000244360 GH2P01242 217 aa24.32■■□□□ 1.48
RNF39-201ENST00000244360 SPIRE1Q08AE8 756 aa24.32■■□□□ 1.48
RNF39-201ENST00000244360 RRP1BQ14684 758 aaKnown RBP24.32■■□□□ 1.48
RNF39-201ENST00000244360 Q4G0T1 1027 aa24.32■■□□□ 1.48
RNF39-201ENST00000244360 RBM26Q5T8P6 1007 aaKnown RBP24.32■■□□□ 1.48
RNF39-201ENST00000244360 MYOCDQ8IZQ8 938 aa24.32■■□□□ 1.48
RNF39-201ENST00000244360 NDST4Q9H3R1 872 aa24.32■■□□□ 1.48
RNF39-201ENST00000244360 ZNHIT6Q9NWK9 470 aaKnown RBP24.32■■□□□ 1.48
RNF39-201ENST00000244360 FOSP01100 380 aaPredicted RBP24.31■■□□□ 1.48
RNF39-201ENST00000244360 BMP3P12645 472 aa24.31■■□□□ 1.48
RNF39-201ENST00000244360 HNRNPH3P31942 346 aaKnown RBP24.31■■□□□ 1.48
RNF39-201ENST00000244360 SREBF1P36956 1147 aa24.31■■□□□ 1.48
RNF39-201ENST00000244360 FAM26FQ5R3K3 315 aa24.31■■□□□ 1.48
RNF39-201ENST00000244360 HDXQ7Z353 690 aa24.31■■□□□ 1.48
RNF39-201ENST00000244360 GLIS3Q8NEA6 775 aa24.31■■□□□ 1.48
RNF39-201ENST00000244360 TSG101Q99816 390 aa24.31■■□□□ 1.48
RNF39-201ENST00000244360 ZSWIM4Q9H7M6 989 aa24.31■■□□□ 1.48
RNF39-201ENST00000244360 BMP2KQ9NSY1 1161 aaPredicted RBP24.31■■□□□ 1.48
RNF39-201ENST00000244360 PANK4Q9NVE7 773 aa24.31■■□□□ 1.48
RNF39-201ENST00000244360 KRT83P78385 493 aa24.31■■□□□ 1.48
RNF39-201ENST00000244360 KIAA1024Q9UPX6 916 aa24.31■■□□□ 1.48
RNF39-201ENST00000244360 POTEB3A0JP26 581 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 ERICH4A6NGS2 130 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 POTECB2RU33 542 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 PLA2G4BP0C869 781 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 CYLC1P35663 651 aaPredicted RBP24.3■■□□□ 1.48
RNF39-201ENST00000244360 POTEBQ6S5H4 581 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 LENG9Q96B70 501 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 CSRNP1Q96S65 589 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 HERC5Q9UII4 1024 aaKnown RBP24.3■■□□□ 1.48
RNF39-201ENST00000244360 PCDHA2Q9Y5H9 948 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 EIF3CLB5ME19 914 aaKnown RBP24.3■■□□□ 1.48
RNF39-201ENST00000244360 E9PMD0 336 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 PPIP5K2O43314 1243 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 EIF3JO75822 258 aaKnown RBP24.3■■□□□ 1.48
RNF39-201ENST00000244360 LRRC41Q15345 812 aa24.3■■□□□ 1.48
RNF39-201ENST00000244360 BEND6Q5SZJ8 279 aaPredicted RBP24.3■■□□□ 1.48
RNF39-201ENST00000244360 EIF3CQ99613 913 aaKnown RBP24.3■■□□□ 1.48
RNF39-201ENST00000244360 A0A1W2PRG0 241 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 FRMD3A2A2Y4 597 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 CIITAP33076 1130 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 AMPD2Q01433 879 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 SLC15A2Q16348 729 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 TEX2Q8IWB9 1127 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 CCDC65Q8IXS2 484 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 PCMTD1Q96MG8 357 aaPredicted RBP24.29■■□□□ 1.48
RNF39-201ENST00000244360 NHEJ1Q9H9Q4 299 aaPredicted RBP24.29■■□□□ 1.48
RNF39-201ENST00000244360 PSMD14O00487 310 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 OPLAHO14841 1288 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 MED24O75448 989 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms