RNA–Protein interactions for RNA: ENST00000239450.4

PCDHB12-201, Transcript of protocadherin beta 12, humanhuman

APPRIS P1 BASIC

Gene PCDHB12, Length 3,853 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-201ENST00000239450 B4DLN1 442 aa12.99□□□□□ -0.33
PCDHB12-201ENST00000239450 UTP14CQ5TAP6 766 aaKnown RBP12.99□□□□□ -0.33
PCDHB12-201ENST00000239450 KCNK18Q7Z418 384 aa12.99□□□□□ -0.33
PCDHB12-201ENST00000239450 GMLQ99445 158 aa12.99□□□□□ -0.33
PCDHB12-201ENST00000239450 MYMKA6NI61 221 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 VCAM1P19320 739 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 CASQ1P31415 396 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 MATR3P43243 847 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 FAM26FQ5R3K3 315 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 RNF207Q6ZRF8 634 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 FAM83AQ86UY5 434 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 SLFN12Q8IYM2 578 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 GMCL1Q96IK5 515 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 TRIM9Q9C026 710 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 RREB1Q92766 1687 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 FAM86B1E9PN63 330 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 FAM86B2P0C5J1 330 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 GCFC2P16383 781 aaKnown RBP12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 ZNF280CQ8ND82 737 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 DYDC2Q96IM9 177 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 BPIFA3Q9BQP9 254 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 KIF2AO00139 706 aaPredicted RBP12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 KIF20AO95235 890 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 CCDC175P0C221 793 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 SNHG28P0DPA3 235 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 RPS12P25398 132 aaKnown RBP12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 COPB1P53618 953 aaKnown RBP12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 BAATQ14032 418 aaPredicted RBP12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 NCAPHQ15003 741 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 KRT31Q15323 416 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 ARMCX5Q6P1M9 558 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 SEPT14Q6ZU15 432 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 APOBEC3FQ8IUX4 373 aaKnown RBP12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 SMCR8Q8TEV9 937 aaPredicted RBP12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 NAP1L4Q99733 375 aaKnown RBP12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 NT5C3AQ9H0P0 336 aa12.98□□□□□ -0.33
PCDHB12-201ENST00000239450 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 CLIC2O15247 247 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 RBL2Q08999 1139 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 PDXDC2PQ6P474 469 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 CNGA4Q8IV77 575 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 SEPT11Q9NVA2 429 aaKnown RBP12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 ESYT2A0FGR8 921 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 MEIS2O14770 477 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 ZBTB39O15060 712 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 AKR1B10O60218 316 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 USO1O60763 962 aaKnown RBP12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 GRB10Q13322 594 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 AP3B2Q13367 1082 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 MKL1Q969V6 931 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 DRC1Q96MC2 740 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 SYT17Q9BSW7 474 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 GUCA1BQ9UMX6 200 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 CCDC169A6NNP5 214 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 SMARCA1P28370 1054 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 SPA17Q15506 151 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 TEX35Q5T0J7 233 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 PPP1R18Q6NYC8 613 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 GMCL1P1Q8NEA9 526 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 UBXN4Q92575 508 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 MTRQ99707 1265 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 CCSER1Q9C0I3 900 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
PCDHB12-201ENST00000239450 ARHGAP6O43182 974 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 PRPF6O94906 941 aaKnown RBP12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 USP14P54578 494 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 PSMC6P62333 389 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 RPS6P62753 249 aaKnown RBP12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 C4orf32Q8N8J7 132 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 NLRC4Q9NPP4 1024 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 PAXBP1Q9Y5B6 917 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 NID2Q14112 1375 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 CTNND1O60716 968 aaKnown RBP12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 ARP10275 920 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 MDM2Q00987 491 aaPredicted RBP12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 MYOCDQ8IZQ8 938 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 GLIS3Q8NEA6 775 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 RAD54LQ92698 747 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 CNOT6LQ96LI5 555 aaKnown RBP12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 TAAR1Q96RJ0 339 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 TUBGCP2Q9BSJ2 902 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 TEKT3Q9BXF9 490 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 COL24A1Q17RW2 1714 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
PCDHB12-201ENST00000239450 MYH1P12882 1939 aa12.96□□□□□ -0.34
PCDHB12-201ENST00000239450 CNTNAP1P78357 1384 aa12.96□□□□□ -0.34
PCDHB12-201ENST00000239450 IPO5O00410 1097 aaKnown RBP12.96□□□□□ -0.34
PCDHB12-201ENST00000239450 MSH4O15457 936 aa12.96□□□□□ -0.34
PCDHB12-201ENST00000239450 MED24O75448 989 aa12.96□□□□□ -0.34
PCDHB12-201ENST00000239450 NLRX1Q86UT6 975 aa12.96□□□□□ -0.34
PCDHB12-201ENST00000239450 P2RX5Q93086 422 aa12.96□□□□□ -0.34
PCDHB12-201ENST00000239450 PMS1P54277 932 aaKnown RBP12.95□□□□□ -0.34
PCDHB12-201ENST00000239450 NAALADL2Q58DX5 795 aa12.95□□□□□ -0.34
PCDHB12-201ENST00000239450 MUM1L1Q5H9M0 696 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms