RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 AGTPBP1Q9UPW5 1226 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 BCRP11274 1271 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 CD44P16070 742 aaKnown RBP17.07■□□□□ 0.32
HDHD3-201ENST00000238379 MRPS9P82933 396 aaKnown RBP17.07■□□□□ 0.32
HDHD3-201ENST00000238379 AMPD3Q01432 767 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 PLS1Q14651 629 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 KCNB1Q14721 858 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 PGM5Q15124 567 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 CT47A1Q5JQC4 288 aaPredicted RBP17.07■□□□□ 0.32
HDHD3-201ENST00000238379 NCAPH2Q6IBW4 605 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 SV2BQ7L1I2 683 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 NIPA1Q7RTP0 329 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 MB21D1Q8N884 522 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 RAD54LQ92698 747 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 SLC10A4Q96EP9 437 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 PURBQ96QR8 312 aaKnown RBP17.07■□□□□ 0.32
HDHD3-201ENST00000238379 NT5C3AQ9H0P0 336 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 ASCC2Q9H1I8 757 aaPredicted RBP17.07■□□□□ 0.32
HDHD3-201ENST00000238379 HSD3B7Q9H2F3 369 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 ACAD9Q9H845 621 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 PXMP2Q9NR77 195 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 BTBD7Q9P203 1132 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 UBIAD1Q9Y5Z9 338 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 A0A0G2JMZ2 1700 aa17.06■□□□□ 0.32
HDHD3-201ENST00000238379 PPP1R3GB7ZBB8 358 aa17.06■□□□□ 0.32
HDHD3-201ENST00000238379 MED24O75448 989 aa17.06■□□□□ 0.32
HDHD3-201ENST00000238379 EIF2AK2P19525 551 aaKnown RBP17.06■□□□□ 0.32
HDHD3-201ENST00000238379 ERCC5P28715 1186 aaPredicted RBP17.06■□□□□ 0.32
HDHD3-201ENST00000238379 IRX3P78415 501 aaPredicted RBP17.06■□□□□ 0.32
HDHD3-201ENST00000238379 SEMA3FQ13275 785 aa17.06■□□□□ 0.32
HDHD3-201ENST00000238379 MCM6Q14566 821 aa17.06■□□□□ 0.32
HDHD3-201ENST00000238379 FASTKD5Q7L8L6 764 aaKnown RBP17.06■□□□□ 0.32
HDHD3-201ENST00000238379 OTOP1Q7RTM1 612 aa17.06■□□□□ 0.32
HDHD3-201ENST00000238379 MED15Q96RN5 788 aa17.06■□□□□ 0.32
HDHD3-201ENST00000238379 PDCD2LQ9BRP1 358 aa17.06■□□□□ 0.32
HDHD3-201ENST00000238379 A1CFQ9NQ94 594 aaKnown RBP17.06■□□□□ 0.32
HDHD3-201ENST00000238379 POTEB3A0JP26 581 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 PEX10O60683 326 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 SPATA31C1P0DKV0 1188 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 PPP2R5CQ13362 524 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 ZNF658Q5TYW1 1059 aaPredicted RBP17.05■□□□□ 0.32
HDHD3-201ENST00000238379 LRCH2Q5VUJ6 765 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 HAUS3Q68CZ6 603 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 GPAT2Q6NUI2 795 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 POTEBQ6S5H4 581 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 CATSPER3Q86XQ3 398 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 SMYD4Q8IYR2 804 aaPredicted RBP17.05■□□□□ 0.32
HDHD3-201ENST00000238379 ERMNQ8TAM6 284 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 ZNF577Q9BSK1 485 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 CYP39A1Q9NYL5 469 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 KIAA1024Q9UPX6 916 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 STK24Q9Y6E0 443 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 MYMKA6NI61 221 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 EML1O00423 815 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 RHOBTB3O94955 611 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 RPA1P27694 616 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 ZNF75DP51815 510 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 HERVK_113P62684 666 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 FKBP1BP68106 108 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 DHX8Q14562 1220 aaKnown RBP17.05■□□□□ 0.32
HDHD3-201ENST00000238379 KMT5BQ4FZB7 885 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 ARHGEF16Q5VV41 709 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 RIOX2Q8IUF8 465 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 CHST13Q8NET6 341 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 ENOX1Q8TC92 643 aaKnown RBP17.05■□□□□ 0.32
HDHD3-201ENST00000238379 WDR11Q9BZH6 1224 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 TRIM5Q9C035 493 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 JADE2Q9NQC1 790 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 KCNH7Q9NS40 1196 aa17.05■□□□□ 0.32
HDHD3-201ENST00000238379 IPO5O00410 1097 aaKnown RBP17.04■□□□□ 0.32
HDHD3-201ENST00000238379 GAS7O60861 476 aa17.04■□□□□ 0.32
HDHD3-201ENST00000238379 SNAPC2Q13487 334 aa17.04■□□□□ 0.32
HDHD3-201ENST00000238379 XRRA1Q6P2D8 792 aa17.04■□□□□ 0.32
HDHD3-201ENST00000238379 CNNM4Q6P4Q7 775 aa17.04■□□□□ 0.32
HDHD3-201ENST00000238379 B3GNT9Q6UX72 402 aa17.04■□□□□ 0.32
HDHD3-201ENST00000238379 RIT2Q99578 217 aa17.04■□□□□ 0.32
HDHD3-201ENST00000238379 E9PMD0 336 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 SOCS7O14512 581 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 TPM4P67936 248 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 VSIG10LQ86VR7 867 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 EIF2AK1Q9BQI3 630 aaKnown RBP17.03■□□□□ 0.32
HDHD3-201ENST00000238379 POLR3CQ9BUI4 534 aaPredicted RBP17.03■□□□□ 0.32
HDHD3-201ENST00000238379 SPATC1LQ9H0A9 340 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 GBA2Q9HCG7 927 aaPredicted RBP17.03■□□□□ 0.32
HDHD3-201ENST00000238379 NMRK2Q9NPI5 230 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 FANCLQ9NW38 375 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 POTEFA5A3E0 1075 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 CNMDO75829 334 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 MYCLP12524 364 aaPredicted RBP17.03■□□□□ 0.32
HDHD3-201ENST00000238379 ASIC1P78348 528 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 POTEGQ6S5H5 508 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 TRMT44Q8IYL2 757 aaKnown RBP17.03■□□□□ 0.32
HDHD3-201ENST00000238379 TRIM44Q96DX7 344 aaPredicted RBP17.03■□□□□ 0.32
HDHD3-201ENST00000238379 HSD17B14Q9BPX1 270 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 LRRC27Q9C0I9 530 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 AGO4Q9HCK5 861 aaKnown RBP17.03■□□□□ 0.32
HDHD3-201ENST00000238379 GDAQ9Y2T3 454 aa17.03■□□□□ 0.32
HDHD3-201ENST00000238379 DHX15O43143 795 aaKnown RBP17.02■□□□□ 0.31
HDHD3-201ENST00000238379 NR3C2P08235 984 aa17.02■□□□□ 0.31
HDHD3-201ENST00000238379 PABPC4Q13310 644 aaKnown RBP eCLIP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms