RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CNPY1Q3B7I2 92 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 BICDL1Q6ZP65 573 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 PI4KAP1Q8N8J0 262 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 ARL10Q8N8L6 244 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 CORO1BQ9BR76 489 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 TTYH3Q9C0H2 523 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 CARD9Q9H257 536 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 RWDD2AQ9UIY3 292 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 GGT7Q9UJ14 662 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 TRIM33Q9UPN9 1127 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 MYO5BQ9ULV0 1848 aa14.24□□□□□ -0.13
MSH2-201ENST00000233146 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 RAD51CO43502 376 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 PIP4K2AP48426 406 aaPredicted RBP14.23□□□□□ -0.13
MSH2-201ENST00000233146 PHEXP78562 749 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 CDK17Q00537 523 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 MTMR3Q13615 1198 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 RBBP8NLQ8NC74 664 aaPredicted RBP14.23□□□□□ -0.13
MSH2-201ENST00000233146 UTP4Q969X6 686 aaKnown RBP14.23□□□□□ -0.13
MSH2-201ENST00000233146 MTFR1LQ9H019 292 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 AGPAT5Q9NUQ2 364 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 MYH2Q9UKX2 1941 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 CCNB1P14635 433 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 CASP1P29466 404 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 CACNA2D1P54289 1103 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 ERVK-9P63128 1117 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 CUL1Q13616 776 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 SPA17Q15506 151 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 SLC4A8Q2Y0W8 1093 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 USP49Q70CQ1 688 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 SLC17A8Q8NDX2 589 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 IQCDQ96DY2 449 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 PAGE5Q96GU1 130 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 FBXL5Q9UKA1 691 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 LRCH1Q9Y2L9 728 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 NPATQ14207 1427 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 LGALS16A8MUM7 142 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 GFPT2O94808 682 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 SERPINB4P48594 390 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 PTDSS1P48651 473 aaKnown RBP14.23□□□□□ -0.13
MSH2-201ENST00000233146 HLTFQ14527 1009 aaKnown RBP eCLIP14.23□□□□□ -0.13
MSH2-201ENST00000233146 DIXDC1Q155Q3 683 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 KRT71Q3SY84 523 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 CEP128Q6ZU80 1094 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 KRT26Q7Z3Y9 468 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 CCNJLQ8IV13 435 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 PPP1R14BQ96C90 147 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 RAB3IPQ96QF0 476 aaPredicted RBP14.23□□□□□ -0.13
MSH2-201ENST00000233146 BRD8Q9H0E9 1235 aa14.23□□□□□ -0.13
MSH2-201ENST00000233146 NSRP1Q9H0G5 558 aaKnown RBP14.23□□□□□ -0.13
MSH2-201ENST00000233146 ESF1Q9H501 851 aaKnown RBP14.23□□□□□ -0.13
MSH2-201ENST00000233146 BARX2Q9UMQ3 279 aaPredicted RBP14.23□□□□□ -0.13
MSH2-201ENST00000233146 GNA14O95837 355 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 AFMP43652 599 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 MMP13P45452 471 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 TOB1P50616 345 aaPredicted RBP14.22□□□□□ -0.13
MSH2-201ENST00000233146 ZNF365Q70YC5 407 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 RAB11FIP4Q86YS3 637 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 PIGOQ8TEQ8 1089 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 ZNF333Q96JL9 665 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 GBP5Q96PP8 586 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 ADAM7Q9H2U9 754 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 LRRC4CQ9HCJ2 640 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 PNMA2Q9UL42 364 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 USP15Q9Y4E8 981 aaPredicted RBP14.22□□□□□ -0.13
MSH2-201ENST00000233146 PCDHA13Q9Y5I0 950 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 GRID2IPA4D2P6 1211 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 SIGLEC16A6NMB1 481 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 BHMG1C9JSJ3 638 aaPredicted RBP14.22□□□□□ -0.13
MSH2-201ENST00000233146 SKIV2L2P42285 1042 aaKnown RBP14.22□□□□□ -0.13
MSH2-201ENST00000233146 KLHDC7AQ5VTJ3 777 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 CCDC80Q76M96 950 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 UBLCP1Q8WVY7 318 aaPredicted RBP14.22□□□□□ -0.13
MSH2-201ENST00000233146 PDP2Q9P2J9 529 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 PNMA3Q9UL41 463 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 NDUFB9Q9Y6M9 179 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 MRC1P22897 1456 aa14.22□□□□□ -0.13
MSH2-201ENST00000233146 RXRBP28702 533 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 PLOD1Q02809 727 aaPredicted RBP14.21□□□□□ -0.13
MSH2-201ENST00000233146 IDI1Q13907 227 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 PI16Q6UXB8 463 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 IRF2BP1Q8IU81 584 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 SPATA16Q9BXB7 569 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 IFIH1Q9BYX4 1025 aaKnown RBP14.21□□□□□ -0.13
MSH2-201ENST00000233146 TMOD4Q9NZQ9 345 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 PAIP2BQ9ULR5 123 aaKnown RBP14.21□□□□□ -0.13
MSH2-201ENST00000233146 SRPRBQ9Y5M8 271 aaKnown RBP14.21□□□□□ -0.13
MSH2-201ENST00000233146 PALLDQ8WX93 1383 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 PARP6Q2NL67 630 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 RETREG2Q8NC44 543 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 CCDC87Q9NVE4 849 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 RMND1Q9NWS8 449 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 HSFX1Q9UBD0 423 aa14.21□□□□□ -0.13
MSH2-201ENST00000233146 A0A087X0B3 334 aa14.21□□□□□ -0.14
MSH2-201ENST00000233146 HSPD1P10809 573 aaKnown RBP14.21□□□□□ -0.14
MSH2-201ENST00000233146 GM2AP17900 193 aa14.21□□□□□ -0.14
MSH2-201ENST00000233146 KBTBD12Q3ZCT8 623 aa14.21□□□□□ -0.14
MSH2-201ENST00000233146 SH2D4BQ5SQS7 431 aa14.21□□□□□ -0.14
MSH2-201ENST00000233146 SPIRE2Q8WWL2 714 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms