RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 RAD51CO43502 376 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 GNAQP50148 359 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 MMP14P50281 582 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 MECOMQ03112 1051 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 GRB10Q13322 594 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 C3orf20Q8ND61 904 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 ZKSCAN4Q969J2 545 aaPredicted RBP17.05■□□□□ 0.32
VTN-201ENST00000226218 TACO1Q9BSH4 297 aaKnown RBP17.05■□□□□ 0.32
VTN-201ENST00000226218 ZMYND12Q9H0C1 365 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 CEP72Q9P209 647 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 SLC12A6Q9UHW9 1150 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 CES2O00748 559 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 FGFR1OPO95684 399 aaKnown RBP17.05■□□□□ 0.32
VTN-201ENST00000226218 SERPING1P05155 500 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 KLRC1P26715 233 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 BRINP3Q76B58 766 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 CCDC13Q8IYE1 715 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 USP38Q8NB14 1042 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 ISCUQ9H1K1 167 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 CHUKO15111 745 aa17.04■□□□□ 0.32
VTN-201ENST00000226218 CAMTA2O94983 1202 aa17.04■□□□□ 0.32
VTN-201ENST00000226218 HOXA7P31268 230 aaPredicted RBP17.04■□□□□ 0.32
VTN-201ENST00000226218 NT5C2P49902 561 aa17.04■□□□□ 0.32
VTN-201ENST00000226218 SETQ01105 290 aaPredicted RBP17.04■□□□□ 0.32
VTN-201ENST00000226218 UAP1Q16222 522 aaPredicted RBP17.04■□□□□ 0.32
VTN-201ENST00000226218 SLC9C1Q4G0N8 1177 aa17.04■□□□□ 0.32
VTN-201ENST00000226218 CCDC40Q4G0X9 1142 aa17.04■□□□□ 0.32
VTN-201ENST00000226218 KRT25Q7Z3Z0 450 aa17.04■□□□□ 0.32
VTN-201ENST00000226218 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
VTN-201ENST00000226218 CYFIP2Q96F07 1278 aa17.04■□□□□ 0.32
VTN-201ENST00000226218 PNMA5Q96PV4 448 aa17.04■□□□□ 0.32
VTN-201ENST00000226218 NUCKS1Q9H1E3 243 aaKnown RBP17.04■□□□□ 0.32
VTN-201ENST00000226218 TAF1DQ9H5J8 278 aaPredicted RBP17.04■□□□□ 0.32
VTN-201ENST00000226218 PALM3A6NDB9 673 aaPredicted RBP17.03■□□□□ 0.32
VTN-201ENST00000226218 C21orf2O43822 256 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 CCNT1O60563 726 aaKnown RBP17.03■□□□□ 0.32
VTN-201ENST00000226218 FTCDO95954 541 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 CHRM1P11229 460 aaPredicted RBP17.03■□□□□ 0.32
VTN-201ENST00000226218 TECP42680 631 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 ERVK-9P63128 1117 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 CEP85LQ5SZL2 805 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
VTN-201ENST00000226218 SV2BQ7L1I2 683 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 CACNA2D4Q7Z3S7 1137 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 KLC4Q9NSK0 619 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 STK17AQ9UEE5 414 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 TFAP4Q01664 338 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 IFT88Q13099 833 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 ORC2Q13416 577 aaPredicted RBP17.03■□□□□ 0.32
VTN-201ENST00000226218 LETM2Q2VYF4 491 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 PREPLQ4J6C6 727 aaPredicted RBP17.03■□□□□ 0.32
VTN-201ENST00000226218 ZCWPW2Q504Y3 356 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 TDRD12Q587J7 1177 aaKnown RBP17.03■□□□□ 0.32
VTN-201ENST00000226218 FBXO33Q7Z6M2 555 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 ARFGAP2Q8N6H7 521 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 JPH2Q9BR39 696 aaPredicted RBP17.03■□□□□ 0.32
VTN-201ENST00000226218 CD248Q9HCU0 757 aa17.03■□□□□ 0.32
VTN-201ENST00000226218 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.32
VTN-201ENST00000226218 C5orf60A6NFR6 353 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 E7EVH7 732 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 ZBTB48P10074 688 aaPredicted RBP17.02■□□□□ 0.32
VTN-201ENST00000226218 HSD17B3P37058 310 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 TNNC1P63316 161 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 NONOQ15233 471 aaKnown RBP eCLIP17.02■□□□□ 0.32
VTN-201ENST00000226218 SLC18A3Q16572 532 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 FAM83BQ5T0W9 1011 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 SFMBT2Q5VUG0 894 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 SCFD2Q8WU76 684 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 CALML4Q96GE6 196 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 ACTR5Q9H9F9 607 aaPredicted RBP17.02■□□□□ 0.32
VTN-201ENST00000226218 SLC40A1Q9NP59 571 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 KAT6BQ8WYB5 2073 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 DOT1LQ8TEK3 1739 aa17.02■□□□□ 0.32
VTN-201ENST00000226218 ROBO1Q9Y6N7 1651 aa17.02■□□□□ 0.31
VTN-201ENST00000226218 MYH7BA7E2Y1 1941 aa17.02■□□□□ 0.31
VTN-201ENST00000226218 BTNL10A8MVZ5 291 aa17.02■□□□□ 0.31
VTN-201ENST00000226218 PAEPP09466 180 aa17.02■□□□□ 0.31
VTN-201ENST00000226218 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.31
VTN-201ENST00000226218 WLSQ5T9L3 541 aa17.02■□□□□ 0.31
VTN-201ENST00000226218 NEK8Q86SG6 692 aa17.02■□□□□ 0.31
VTN-201ENST00000226218 PROM2Q8N271 834 aa17.02■□□□□ 0.31
VTN-201ENST00000226218 LARP4BQ92615 738 aaKnown RBP17.02■□□□□ 0.31
VTN-201ENST00000226218 RIC8AQ9NPQ8 531 aa17.02■□□□□ 0.31
VTN-201ENST00000226218 PACSIN2Q9UNF0 486 aaPredicted RBP17.02■□□□□ 0.31
VTN-201ENST00000226218 TRAPPC3O43617 180 aa17.01■□□□□ 0.31
VTN-201ENST00000226218 ZPR1O75312 459 aa17.01■□□□□ 0.31
VTN-201ENST00000226218 CCDC172P0C7W6 258 aa17.01■□□□□ 0.31
VTN-201ENST00000226218 EVA1CP58658 441 aa17.01■□□□□ 0.31
VTN-201ENST00000226218 BYSLQ13895 437 aaKnown RBP17.01■□□□□ 0.31
VTN-201ENST00000226218 RNF187Q5TA31 235 aaPredicted RBP17.01■□□□□ 0.31
VTN-201ENST00000226218 MAATS1Q7Z4T9 603 aa17.01■□□□□ 0.31
VTN-201ENST00000226218 MTMR9Q96QG7 549 aa17.01■□□□□ 0.31
VTN-201ENST00000226218 OSBPL7Q9BZF2 842 aa17.01■□□□□ 0.31
VTN-201ENST00000226218 NLRC4Q9NPP4 1024 aa17.01■□□□□ 0.31
VTN-201ENST00000226218 MCM8Q9UJA3 840 aa17.01■□□□□ 0.31
VTN-201ENST00000226218 NAV1Q8NEY1 1877 aa17.01■□□□□ 0.31
VTN-201ENST00000226218 USP17L8P0C7I0 530 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms