RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ECM1Q16610 540 aa24.37■■□□□ 1.49
SMARCD2-201ENST00000225742 IQCEQ6IPM2 695 aa24.37■■□□□ 1.49
SMARCD2-201ENST00000225742 ANO3Q9BYT9 981 aa24.37■■□□□ 1.49
SMARCD2-201ENST00000225742 LACRTQ9GZZ8 138 aa24.37■■□□□ 1.49
SMARCD2-201ENST00000225742 PCDHA1Q9Y5I3 950 aa24.37■■□□□ 1.49
SMARCD2-201ENST00000225742 COL4A3BPQ9Y5P4 624 aa24.37■■□□□ 1.49
SMARCD2-201ENST00000225742 TARSL2A2RTX5 802 aaKnown RBP24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 TBX3O15119 743 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 TRIM37O94972 964 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 RHOXF2BP0C7M4 288 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 SLC1A4P43007 532 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 USP14P54578 494 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 NFIAQ12857 509 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 CERKLQ49MI3 558 aaPredicted RBP24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 NCAPH2Q6IBW4 605 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 FLAD1Q8NFF5 587 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 TRIM58Q8NG06 486 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 NEK11Q8NG66 645 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 RHOXF2Q9BQY4 288 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 MMRN2Q9H8L6 949 aa24.36■■□□□ 1.49
SMARCD2-201ENST00000225742 TACC1O75410 805 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 EEF2P13639 858 aaKnown RBP24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 MARSP56192 900 aaKnown RBP24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 STRIP1Q5VSL9 837 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 TATDN1Q6P1N9 297 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 SYN2Q92777 582 aaPredicted RBP24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 DNAJC18Q9H819 358 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 QTRT2Q9H974 415 aaKnown RBP24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 ABCB6Q9NP58 842 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 PCDHA13Q9Y5I0 950 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 COL11A2P13942 1736 aaPredicted RBP24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 PITPNM2Q9BZ72 1349 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 RCCD1A6NED2 376 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 PLA2G4BP0C869 781 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 PRLRP16471 622 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 CYP2C19P33261 490 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 MAPK8IP2Q13387 824 aaPredicted RBP24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 CDC37Q16543 378 aaPredicted RBP24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 TAF3Q5VWG9 929 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 PDXDC1Q6P996 788 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 C2CD5Q86YS7 1000 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 TEX2Q8IWB9 1127 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 NOA1Q8NC60 698 aaKnown RBP24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 ARHGAP20Q9P2F6 1191 aa24.35■■□□□ 1.49
SMARCD2-201ENST00000225742 SSU72P8A0A1W2PR75 194 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 FOSP01100 380 aaPredicted RBP24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 KIF11P52732 1056 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 VSNL1P62760 191 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 HAUS3Q68CZ6 603 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 PPP4R3CPQ6ZMV5 832 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 TMEM179Q6ZVK1 233 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 ZC3H3Q8IXZ2 948 aaKnown RBP24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 GMCL1P1Q8NEA9 526 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 BAP1Q92560 729 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 TRIM34Q9BYJ4 488 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 IFIH1Q9BYX4 1025 aaKnown RBP24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 ACBD3Q9H3P7 528 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 FAM207AQ9NSI2 230 aaPredicted RBP24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 JRKLQ9Y4A0 524 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 PCDHA2Q9Y5H9 948 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 BRWD3Q6RI45 1802 aa24.34■■□□□ 1.49
SMARCD2-201ENST00000225742 ENC1O14682 589 aa24.33■■□□□ 1.49
SMARCD2-201ENST00000225742 PJA2O43164 708 aa24.33■■□□□ 1.49
SMARCD2-201ENST00000225742 ERMNQ8TAM6 284 aa24.33■■□□□ 1.49
SMARCD2-201ENST00000225742 SH2D4AQ9H788 454 aa24.33■■□□□ 1.49
SMARCD2-201ENST00000225742 HDAC6Q9UBN7 1215 aa24.33■■□□□ 1.49
SMARCD2-201ENST00000225742 FAM184BQ9ULE4 1060 aa24.33■■□□□ 1.49
SMARCD2-201ENST00000225742 KIAA1024Q9UPX6 916 aa24.33■■□□□ 1.49
SMARCD2-201ENST00000225742 FRMD3A2A2Y4 597 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 CCDC66A2RUB6 948 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 ZNF263O14978 683 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 EIF4A3P38919 411 aaKnown RBP24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 LRRC41Q15345 812 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 MAP9Q49MG5 647 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 Q4G0T1 1027 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 CCDC40Q4G0X9 1142 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 ZFPM1Q8IX07 1006 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 CRYGNQ8WXF5 182 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 GMCL1Q96IK5 515 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 AMNQ9BXJ7 453 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 DEF6Q9H4E7 631 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 CEP72Q9P209 647 aa24.33■■□□□ 1.48
SMARCD2-201ENST00000225742 USP17L15C9J2P7 530 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 USP17L13C9JLJ4 530 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 USP17L11C9JVI0 530 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 USP17L18D6R9N7 530 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 USP17L22D6RA61 530 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 USP17L17D6RBQ6 530 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 USP17L19D6RCP7 530 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 USP17L20D6RJB6 530 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 TRAF5O00463 557 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 NKRFO15226 690 aaKnown RBP eCLIP24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 POLR3GO15318 223 aaPredicted RBP24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 TFRCP02786 760 aaKnown RBP24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 MMP14P50281 582 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 CYP27A1Q02318 531 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 USP17L24Q0WX57 530 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 USP17L6PQ6QN14 398 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 RRAGAQ7L523 313 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms