RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 CALN1Q9BXU9 219 aa16.08■□□□□ 0.17
UBR5-201ENST00000220959 SYMPKQ92797 1274 aaKnown RBP16.08■□□□□ 0.16
UBR5-201ENST00000220959 ARHGEF10O15013 1369 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 DTNBO60941 627 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 AFPP02771 609 aaKnown RBP16.08■□□□□ 0.16
UBR5-201ENST00000220959 BASP1P80723 227 aaKnown RBP16.08■□□□□ 0.16
UBR5-201ENST00000220959 TRIM67Q6ZTA4 783 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 IFNAR2P48551 515 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 CEP170P1Q96L14 293 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 TOM1L1O75674 476 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 SPICE1Q8N0Z3 855 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 SIX6OS1Q8N1H7 587 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 N4BP2L2Q92802 583 aaPredicted RBP16.08■□□□□ 0.16
UBR5-201ENST00000220959 TMEM206Q9H813 350 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 EFCAB8A8MWE9 144 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 DSTYKQ6XUX3 929 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 JRKLQ9Y4A0 524 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 DAAM1Q9Y4D1 1078 aa16.08■□□□□ 0.16
UBR5-201ENST00000220959 SNCBQ16143 134 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 ZBTB41Q5SVQ8 909 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 SPOPLQ6IQ16 392 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 DNAJC24Q6P3W2 148 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 WDR11Q9BZH6 1224 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 LAD1O00515 517 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 ADD1P35611 737 aaKnown RBP16.07■□□□□ 0.16
UBR5-201ENST00000220959 RNF219Q5W0B1 726 aaPredicted RBP16.07■□□□□ 0.16
UBR5-201ENST00000220959 NEUROG2Q9H2A3 272 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 NR2F2P24468 414 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 ZBED2Q9BTP6 218 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 TRIM4Q9C037 500 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 KRT1P04264 644 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 ARL13BQ3SXY8 428 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 SZRD1Q7Z422 152 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 CCDC197Q8NCU1 140 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 SLITRK6Q9H5Y7 841 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 TTLL1O95922 423 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 COPB1P53618 953 aaKnown RBP16.07■□□□□ 0.16
UBR5-201ENST00000220959 LZICQ8WZA0 190 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 YWHAHQ04917 246 aaPredicted RBP16.07■□□□□ 0.16
UBR5-201ENST00000220959 TCP11X2Q5H9J9 407 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.07■□□□□ 0.16
UBR5-201ENST00000220959 LRRN2O75325 713 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 CMA1P23946 247 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 TMED2Q15363 201 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 TUBGCP2Q9BSJ2 902 aa16.07■□□□□ 0.16
UBR5-201ENST00000220959 PRPSAP2O60256 369 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 NCF2P19878 526 aaPredicted RBP16.06■□□□□ 0.16
UBR5-201ENST00000220959 CCHCR1Q8TD31 782 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 GIPC2Q8TF65 315 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 SNX19Q92543 992 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 EDC3Q96F86 508 aaKnown RBP16.06■□□□□ 0.16
UBR5-201ENST00000220959 FANCLQ9NW38 375 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 ZNF518AQ6AHZ1 1483 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 UBXN2AP68543 259 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 KCTD1Q719H9 257 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 CUEDC2Q9H467 287 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 MID2Q9UJV3 735 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 PPEF1O14829 653 aaPredicted RBP16.06■□□□□ 0.16
UBR5-201ENST00000220959 ZBTB33Q86T24 672 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 RPF1Q9H9Y2 349 aaKnown RBP16.06■□□□□ 0.16
UBR5-201ENST00000220959 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 MYCP01106 439 aaPredicted RBP16.06■□□□□ 0.16
UBR5-201ENST00000220959 MT-ND3P03897 115 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 PAMP19021 973 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 CFAP36Q96G28 342 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 PCIF1Q9H4Z3 704 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 OR6B2Q6IFH4 312 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 CYP4F22Q6NT55 531 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 FRA10AC1Q70Z53 315 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 DHX38Q92620 1227 aaKnown RBP16.06■□□□□ 0.16
UBR5-201ENST00000220959 ANLNQ9NQW6 1124 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 FAM95CA0A1B0GW59 222 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 H3BRJ5 948 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 OCRLQ01968 901 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 SURF1Q15526 300 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 TRIM59Q8IWR1 403 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 CLIC6Q96NY7 704 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 ORAI2Q96SN7 254 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 POLIQ9UNA4 740 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 ZNF804BA4D1E1 1349 aa16.06■□□□□ 0.16
UBR5-201ENST00000220959 CHRNDQ07001 517 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 ACBD5Q5T8D3 534 aaPredicted RBP16.05■□□□□ 0.16
UBR5-201ENST00000220959 TUBB6Q9BUF5 446 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 ABT1Q9ULW3 272 aaKnown RBP16.05■□□□□ 0.16
UBR5-201ENST00000220959 HSPA6P17066 643 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 SERPINI1Q99574 410 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 MED4Q9NPJ6 270 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 DONSONQ9NYP3 566 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 SEMA3EO15041 775 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 MAP3K7O43318 606 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 PFDN1O60925 122 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 TRPA1O75762 1119 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 OCM2P0CE71 109 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 OCMP0CE72 109 aaPredicted RBP16.05■□□□□ 0.16
UBR5-201ENST00000220959 EEF1DP29692 281 aaKnown RBP16.05■□□□□ 0.16
UBR5-201ENST00000220959 BZW1Q7L1Q6 419 aaKnown RBP16.05■□□□□ 0.16
UBR5-201ENST00000220959 HACD3Q9P035 362 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 LARP4BQ92615 738 aaKnown RBP16.05■□□□□ 0.16
UBR5-201ENST00000220959 ZNF18P17022 549 aa16.05■□□□□ 0.16
UBR5-201ENST00000220959 DRP2Q13474 957 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms