RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 DZIP1Q86YF9 867 aaKnown RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 CNKSR1Q969H4 720 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 RRP36Q96EU6 259 aaKnown RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 L3MBTL3Q96JM7 780 aaPredicted RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 NAA15Q9BXJ9 866 aaKnown RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 TTF2Q9UNY4 1162 aaKnown RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 AKR1B15C9JRZ8 316 aaPredicted RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 PTPREP23469 700 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 RIPK1Q13546 671 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 CCDC38Q502W7 563 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 MMS19Q96T76 1030 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 OSBPL1AQ9BXW6 950 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 POLD4Q9HCU8 107 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 CABP5Q9NP86 173 aa15□□□□□ -0.01
GABPB1-201ENST00000220429 ARPP21Q9UBL0 812 aaPredicted RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 V9GY48 417 aaPredicted RBP15□□□□□ -0.01
GABPB1-201ENST00000220429 FAM205CA6NFA0 338 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 HSF2BPO75031 334 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 DDAH1O94760 285 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 SPTY2D1Q68D10 685 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-201ENST00000220429 PROCA1Q8NCQ7 364 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-201ENST00000220429 TEKT4Q8WW24 435 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 RPGRIP1Q96KN7 1286 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 PHF20Q9BVI0 1012 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 TSPYL2Q9H2G4 693 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-201ENST00000220429 LEMD3Q9Y2U8 911 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 RASSF10A6NK89 507 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 STXBP3O00186 592 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 CALM1P0DP23 149 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 CALM2P0DP24 149 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 CALM3P0DP25 149 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 MYBL1P10243 752 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 PAX3P23760 479 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 MDH1P40925 334 aaKnown RBP14.99□□□□□ -0.01
GABPB1-201ENST00000220429 ABL2P42684 1182 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 PPP1R7Q15435 360 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 EMC10Q5UCC4 262 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 PRR5LQ6MZQ0 368 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 TMTC3Q6ZXV5 915 aa14.99□□□□□ -0.01
GABPB1-201ENST00000220429 GPR101Q96P66 508 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-201ENST00000220429 ATP2C2O75185 946 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 USP17L8P0C7I0 530 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 MYBPC3Q14896 1274 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 GRIK5Q16478 980 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 SLC4A8Q2Y0W8 1093 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 EARS2Q5JPH6 523 aaKnown RBP14.98□□□□□ -0.01
GABPB1-201ENST00000220429 TRAPPC11Q7Z392 1133 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 FOXP4Q8IVH2 680 aaPredicted RBP14.98□□□□□ -0.01
GABPB1-201ENST00000220429 FAM167BQ9BTA0 163 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 XDHP47989 1333 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 CNTNAP5Q8WYK1 1306 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 CDK5RAP2Q96SN8 1893 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.98□□□□□ -0.01
GABPB1-201ENST00000220429 DPPA5A6NC42 116 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 FOXN1O15353 648 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 CREB3O43889 395 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 ONECUT3O60422 494 aaPredicted RBP14.98□□□□□ -0.01
GABPB1-201ENST00000220429 UPP2O95045 317 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 ABL1P00519 1130 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 SYCP3Q8IZU3 236 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 P3H4Q92791 437 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 PHACTR1Q9C0D0 580 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 MCM9Q9NXL9 1143 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 WDR35Q9P2L0 1181 aa14.98□□□□□ -0.01
GABPB1-201ENST00000220429 AFF2P51816 1311 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 LRRD1A4D1F6 860 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 LDHBP07195 334 aaKnown RBP14.97□□□□□ -0.01
GABPB1-201ENST00000220429 XBP1P17861 261 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 MXRA7P84157 204 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 MEX3CQ5U5Q3 659 aaKnown RBP14.97□□□□□ -0.01
GABPB1-201ENST00000220429 SEPT12Q8IYM1 358 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 SRBD1Q8N5C6 995 aaKnown RBP14.97□□□□□ -0.01
GABPB1-201ENST00000220429 WDR66Q8TBY9 1149 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 HVCN1Q96D96 273 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 PIDD1Q9HB75 910 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 C2CD2Q9Y426 696 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 NR1D1P20393 614 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 CNGA1P29973 690 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 KRT2P35908 639 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 MDM2Q00987 491 aaPredicted RBP14.97□□□□□ -0.01
GABPB1-201ENST00000220429 PDE4BQ07343 736 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 NPY5RQ15761 445 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 HSP90AA4PQ58FG1 418 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 SRPRBQ9Y5M8 271 aaKnown RBP14.97□□□□□ -0.01
GABPB1-201ENST00000220429 NAV1Q8NEY1 1877 aa14.97□□□□□ -0.01
GABPB1-201ENST00000220429 TSPY2A6NKD2 308 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 GHRP10912 638 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 ADRA2BP18089 450 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 DIXDC1Q155Q3 683 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 APLFQ8IW19 511 aaPredicted RBP14.96□□□□□ -0.01
GABPB1-201ENST00000220429 TEX9Q8N6V9 391 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 SH3RF3Q8TEJ3 882 aaPredicted RBP14.96□□□□□ -0.01
GABPB1-201ENST00000220429 AGAP11Q8TF27 550 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 SUN2Q9UH99 717 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 ALDH3A1P30838 453 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 APBA1Q02410 837 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 C12orf60Q5U649 245 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 OLFM4Q6UX06 510 aa14.96□□□□□ -0.01
GABPB1-201ENST00000220429 ZNF579Q8NAF0 562 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms