RNA–Protein interactions for RNA: ENST00000196061.4

PLOD1-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLOD1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-201ENST00000196061 KCND1Q9NSA2 647 aa13.22□□□□□ -0.29
PLOD1-201ENST00000196061 HOOK1Q9UJC3 728 aaKnown RBP13.22□□□□□ -0.29
PLOD1-201ENST00000196061 TFR2Q9UP52 801 aa13.22□□□□□ -0.29
PLOD1-201ENST00000196061 ARL6IP4Q66PJ3 421 aaKnown RBP13.21□□□□□ -0.29
PLOD1-201ENST00000196061 LENG9Q96B70 501 aa13.21□□□□□ -0.29
PLOD1-201ENST00000196061 TRIM9Q9C026 710 aa13.21□□□□□ -0.29
PLOD1-201ENST00000196061 HTTP42858 3142 aa13.21□□□□□ -0.29
PLOD1-201ENST00000196061 TULP2O00295 520 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.3
PLOD1-201ENST00000196061 ELF2Q15723 593 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 EEPD1Q7L9B9 569 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 FAM83AQ86UY5 434 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 TPH2Q8IWU9 490 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 IGSF22Q8N9C0 903 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 KIAA0895Q8NCT3 520 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 BANK1Q8NDB2 785 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 DDX12PQ92771 950 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 TAAR1Q96RJ0 339 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 SRRTQ9BXP5 876 aaKnown RBP13.21□□□□□ -0.3
PLOD1-201ENST00000196061 ELP3Q9H9T3 547 aa13.21□□□□□ -0.3
PLOD1-201ENST00000196061 WRAP73Q9P2S5 460 aaPredicted RBP13.21□□□□□ -0.3
PLOD1-201ENST00000196061 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 TRAF5O00463 557 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 BMP15O95972 392 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 KRT79Q5XKE5 535 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 CCDC125Q86Z20 511 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 SPATA20Q8TB22 786 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 CALML4Q96GE6 196 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 SLU7O95391 586 aaKnown RBP13.2□□□□□ -0.3
PLOD1-201ENST00000196061 LMNB1P20700 586 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 KCNA1Q09470 495 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 GPR162Q16538 588 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 GALNT17Q6IS24 598 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 IPO4Q8TEX9 1081 aaKnown RBP13.2□□□□□ -0.3
PLOD1-201ENST00000196061 NOC3LQ8WTT2 800 aaKnown RBP13.2□□□□□ -0.3
PLOD1-201ENST00000196061 LARP4BQ92615 738 aaKnown RBP13.2□□□□□ -0.3
PLOD1-201ENST00000196061 TRIM47Q96LD4 638 aa13.2□□□□□ -0.3
PLOD1-201ENST00000196061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.2□□□□□ -0.33e-7■■■■■ 76.6
PLOD1-201ENST00000196061 ESYT2A0FGR8 921 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 PTPRAP18433 802 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 CASP5P51878 434 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 CCZ1BP86790 482 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 CCZ1P86791 482 aaPredicted RBP13.19□□□□□ -0.3
PLOD1-201ENST00000196061 TMEM266Q2M3C6 531 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 ANKRD40Q6AI12 368 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 CATSPER3Q86XQ3 398 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 KIF2AO00139 706 aaPredicted RBP13.19□□□□□ -0.3
PLOD1-201ENST00000196061 NT5DC1Q5TFE4 455 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 PAGR1Q9BTK6 254 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 ZNF446Q9NWS9 450 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■□□□□ 9.4
PLOD1-201ENST00000196061 V9GYY5 206 aaPredicted RBP13.19□□□□□ -0.3
PLOD1-201ENST00000196061 KRT18P05783 430 aaKnown RBP13.19□□□□□ -0.3
PLOD1-201ENST00000196061 MLKLQ8NB16 471 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 PICK1Q9NRD5 415 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 EXOC1Q9NV70 894 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 KBTBD4Q9NVX7 518 aa13.19□□□□□ -0.3
PLOD1-201ENST00000196061 CTDP1Q9Y5B0 961 aaPredicted RBP13.19□□□□□ -0.3
PLOD1-201ENST00000196061 ATAD5Q96QE3 1844 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 TESPA1A2RU30 521 aaPredicted RBP13.18□□□□□ -0.3
PLOD1-201ENST00000196061 GCOM1H8Y6P7 765 aaPredicted RBP13.18□□□□□ -0.3
PLOD1-201ENST00000196061 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 H2AFXP16104 143 aaPredicted RBP13.18□□□□□ -0.3
PLOD1-201ENST00000196061 CYP2C19P33261 490 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 SOX10P56693 466 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 RPS6P62753 249 aaKnown RBP13.18□□□□□ -0.3
PLOD1-201ENST00000196061 PAK1Q13153 545 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 VGLL4Q14135 290 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 BMS1Q14692 1282 aaKnown RBP13.18□□□□□ -0.3
PLOD1-201ENST00000196061 KRT31Q15323 416 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 WDR78Q5VTH9 848 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 CCAR2Q8N163 923 aaKnown RBP13.18□□□□□ -0.3
PLOD1-201ENST00000196061 SLF1Q9BQI6 1058 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 BHMT2Q9H2M3 363 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 SAMM50Q9Y512 469 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 TPM4P67936 248 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 MAP1SQ66K74 1059 aaPredicted RBP13.18□□□□□ -0.3
PLOD1-201ENST00000196061 SV2BQ7L1I2 683 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 KRT26Q7Z3Y9 468 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 GPBP1Q86WP2 473 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 IRF2BP1Q8IU81 584 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 DYDC2Q96IM9 177 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 CCSER1Q9C0I3 900 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 USP20Q9Y2K6 914 aa13.18□□□□□ -0.3
PLOD1-201ENST00000196061 ERICH4A6NGS2 130 aa13.17□□□□□ -0.3
PLOD1-201ENST00000196061 ATP9AO75110 1047 aa13.17□□□□□ -0.3
PLOD1-201ENST00000196061 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
PLOD1-201ENST00000196061 ABL1P00519 1130 aa13.17□□□□□ -0.3
PLOD1-201ENST00000196061 ITGB5P18084 799 aa13.17□□□□□ -0.3
PLOD1-201ENST00000196061 SMARCA1P28370 1054 aa13.17□□□□□ -0.3
PLOD1-201ENST00000196061 TNFAIP1Q13829 316 aa13.17□□□□□ -0.3
PLOD1-201ENST00000196061 SNRNP48Q6IEG0 339 aaKnown RBP13.17□□□□□ -0.3
PLOD1-201ENST00000196061 KANK3Q6NY19 840 aa13.17□□□□□ -0.3
PLOD1-201ENST00000196061 MTMR14Q8NCE2 650 aa13.17□□□□□ -0.3
PLOD1-201ENST00000196061 ETNPPLQ8TBG4 499 aa13.17□□□□□ -0.3
PLOD1-201ENST00000196061 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms