RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 NAV1Q8NEY1 1877 aa22.4■■□□□ 1.18
RCN1-201ENST00000054950 PJA2O43164 708 aa22.4■■□□□ 1.18
RCN1-201ENST00000054950 HEXIM1O94992 359 aaKnown RBP22.4■■□□□ 1.18
RCN1-201ENST00000054950 CACNB1Q02641 598 aaPredicted RBP22.4■■□□□ 1.18
RCN1-201ENST00000054950 COBLL1Q53SF7 1204 aa22.4■■□□□ 1.18
RCN1-201ENST00000054950 CCDC84Q86UT8 332 aaPredicted RBP22.4■■□□□ 1.18
RCN1-201ENST00000054950 KAT2BQ92831 832 aa22.4■■□□□ 1.18
RCN1-201ENST00000054950 ANKIB1Q9P2G1 1089 aa22.4■■□□□ 1.18
RCN1-201ENST00000054950 IRS2Q9Y4H2 1338 aa22.39■■□□□ 1.18
RCN1-201ENST00000054950 EBAG9O00559 213 aa22.39■■□□□ 1.17
RCN1-201ENST00000054950 NOL4O94818 638 aa22.39■■□□□ 1.17
RCN1-201ENST00000054950 SPTY2D1Q68D10 685 aaPredicted RBP22.39■■□□□ 1.17
RCN1-201ENST00000054950 EMBQ6PCB8 327 aa22.39■■□□□ 1.17
RCN1-201ENST00000054950 CLEC10AQ8IUN9 316 aa22.39■■□□□ 1.17
RCN1-201ENST00000054950 KLRC1P26715 233 aa22.39■■□□□ 1.17
RCN1-201ENST00000054950 POLR2FP61218 127 aaKnown RBP22.39■■□□□ 1.17
RCN1-201ENST00000054950 SLC10A5Q5PT55 438 aa22.39■■□□□ 1.17
RCN1-201ENST00000054950 NELFCDQ8IXH7 590 aa22.39■■□□□ 1.17
RCN1-201ENST00000054950 RAD54LQ92698 747 aa22.39■■□□□ 1.17
RCN1-201ENST00000054950 LSM14BQ9BX40 385 aaKnown RBP22.39■■□□□ 1.17
RCN1-201ENST00000054950 COL16A1Q07092 1604 aaPredicted RBP22.39■■□□□ 1.17
RCN1-201ENST00000054950 OPA1O60313 960 aa22.38■■□□□ 1.17
RCN1-201ENST00000054950 SSBP05455 408 aaKnown RBP eCLIP22.38■■□□□ 1.17
RCN1-201ENST00000054950 EIF6P56537 245 aaKnown RBP22.38■■□□□ 1.17
RCN1-201ENST00000054950 PTF1AQ7RTS3 328 aa22.38■■□□□ 1.17
RCN1-201ENST00000054950 KRT12Q99456 494 aa22.38■■□□□ 1.17
RCN1-201ENST00000054950 TRAF5O00463 557 aa22.38■■□□□ 1.17
RCN1-201ENST00000054950 CCDC40Q4G0X9 1142 aa22.38■■□□□ 1.17
RCN1-201ENST00000054950 PROCA1Q8NCQ7 364 aaPredicted RBP22.38■■□□□ 1.17
RCN1-201ENST00000054950 CAVIN3Q969G5 261 aa22.38■■□□□ 1.17
RCN1-201ENST00000054950 GOLPH3Q9H4A6 298 aa22.38■■□□□ 1.17
RCN1-201ENST00000054950 A0A087WUV0 522 aaPredicted RBP22.37■■□□□ 1.17
RCN1-201ENST00000054950 ZNF233A6NK53 670 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 ZEB2O60315 1214 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 NNTQ13423 1086 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 NFIXQ14938 502 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 UBE2SQ16763 222 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 CFAP221Q4G0U5 840 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 FAM83BQ5T0W9 1011 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 TBC1D5Q92609 795 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 LZTS2Q9BRK4 669 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.37■■□□□ 1.17
RCN1-201ENST00000054950 PVALEFA0A1B0GWK0 134 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 BTDP43251 543 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 TNNI2P48788 182 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 LRRC63Q05C16 580 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 EHHADHQ08426 723 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 ICE2Q659A1 982 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 IQCDQ96DY2 449 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 SETDB2Q96T68 719 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 STK17AQ9UEE5 414 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 SPATA31A1Q5TZJ5 1347 aa22.37■■□□□ 1.17
RCN1-201ENST00000054950 DDX60LQ5H9U9 1706 aaKnown RBP22.36■■□□□ 1.17
RCN1-201ENST00000054950 BAG3O95817 575 aa22.36■■□□□ 1.17
RCN1-201ENST00000054950 TM4SF1P30408 202 aa22.36■■□□□ 1.17
RCN1-201ENST00000054950 LRRC47Q8N1G4 583 aaKnown RBP22.36■■□□□ 1.17
RCN1-201ENST00000054950 IPO4Q8TEX9 1081 aaKnown RBP22.36■■□□□ 1.17
RCN1-201ENST00000054950 NPHP3-ACAD11A0A0J9YXS1 232 aa22.36■■□□□ 1.17
RCN1-201ENST00000054950 SHTN1A0MZ66 631 aa22.36■■□□□ 1.17
RCN1-201ENST00000054950 GUCY1A3Q02108 690 aa22.36■■□□□ 1.17
RCN1-201ENST00000054950 COASYQ13057 564 aa22.36■■□□□ 1.17
RCN1-201ENST00000054950 RAPGEF1Q13905 1077 aa22.36■■□□□ 1.17
RCN1-201ENST00000054950 SFMBT2Q5VUG0 894 aa22.36■■□□□ 1.17
RCN1-201ENST00000054950 CASKIN2Q8WXE0 1202 aa22.36■■□□□ 1.17
RCN1-201ENST00000054950 RNPC3Q96LT9 517 aaKnown RBP22.36■■□□□ 1.17
RCN1-201ENST00000054950 RTFDC1Q9BY42 306 aaPredicted RBP22.36■■□□□ 1.17
RCN1-201ENST00000054950 A0A087X0T9 212 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 FAM228BP0C875 321 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 FXR2P51116 673 aaKnown RBP eCLIP22.35■■□□□ 1.17
RCN1-201ENST00000054950 FBXW10Q5XX13 1052 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 ALS2CLQ60I27 953 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 PIK3R5Q8WYR1 880 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 COL4A3BPQ9Y5P4 624 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 SBF2Q86WG5 1849 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 COL5A3P25940 1745 aaPredicted RBP22.35■■□□□ 1.17
RCN1-201ENST00000054950 ERLIN2O94905 339 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 EPB41P11171 864 aaKnown RBP22.35■■□□□ 1.17
RCN1-201ENST00000054950 TMEM266Q2M3C6 531 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 SLC9C1Q4G0N8 1177 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 GBP6Q6ZN66 633 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 AMIGO3Q86WK7 504 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 MYOCDQ8IZQ8 938 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 FAM133AQ8N9E0 248 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 TSG101Q99816 390 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 GDF3Q9NR23 364 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 ADAMTS1Q9UHI8 967 aa22.35■■□□□ 1.17
RCN1-201ENST00000054950 SSU72P8A0A1W2PR75 194 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 FGFR1OPO95684 399 aaKnown RBP22.34■■□□□ 1.17
RCN1-201ENST00000054950 CFAP58Q5T655 872 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 KRT79Q5XKE5 535 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 KLHL7Q8IXQ5 586 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 WDR66Q8TBY9 1149 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 DNAJC19Q96DA6 116 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 GPCPD1Q9NPB8 672 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 NDUFAB1O14561 156 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 CPP00450 1065 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 C16orf86Q6ZW13 317 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 IFT20Q8IY31 132 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 NEDD1Q8NHV4 660 aa22.34■■□□□ 1.17
RCN1-201ENST00000054950 RUBCNQ92622 972 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms