RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	BIT2	P38346	545 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	RBG1	P39729	369 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	GDI1	P39958	451 aa	Known RBP	4.37	□□□□□ -1.71
GDE1	YPL110C	YIL089W	P40500	205 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	LSB6	P42951	607 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	RSM27	P53305	110 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	COG5	P53951	403 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	KTR6	P54070	446 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	SKI8	Q02793	397 aa	Predicted RBP	4.37	□□□□□ -1.71
GDE1	YPL110C	PEX25	Q02969	394 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	TRS31	Q03337	283 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	RSN1	Q03516	953 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	SOV1	Q04748	898 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	UAF30	Q08747	228 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	PAR32	Q12515	295 aa	Known RBP	4.37	□□□□□ -1.71
GDE1	YPL110C	YBR298C-A	Q8TGK4	73 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	SEM1	O94742	89 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	ADE5,7	P07244	802 aa	Known RBP	4.37	□□□□□ -1.71
GDE1	YPL110C	SIR1	P21691	654 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	AIM17	P23180	465 aa	Known RBP	4.37	□□□□□ -1.71
GDE1	YPL110C	UGA4	P32837	571 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	SPC29	P33419	253 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	ECM8	P38246	354 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	FKH1	P40466	484 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	HIS6	P40545	261 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	NAS2	P40555	220 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	QRI7	P43122	407 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	YJR115W	P47152	169 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	HSV2	P50079	448 aa	Predicted RBP	4.37	□□□□□ -1.71
GDE1	YPL110C	GET1	P53192	235 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	DID2	P69771	204 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	VBA4	Q04602	768 aa	Known RBP	4.37	□□□□□ -1.71
GDE1	YPL110C	TMA10	Q06177	86 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	CDA2	Q06703	312 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	KEL3	Q08979	651 aa	Predicted RBP	4.37	□□□□□ -1.71
GDE1	YPL110C	YPL150W	Q12152	901 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	GET3	Q12154	354 aa	Known RBP	4.37	□□□□□ -1.71
GDE1	YPL110C	YPT6	Q99260	215 aa		4.37	□□□□□ -1.71
GDE1	YPL110C	COB	P00163	385 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	MET17	P06106	444 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	RAD7	P06779	565 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	ATR1	P13090	542 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	MIR1	P23641	311 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	NGR1	P32831	672 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	YOX1	P34161	385 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	AKR1	P39010	764 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	EMW1	P42842	904 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	YJL016W	P47072	561 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	YJR111C	P47148	283 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	PMT5	P52867	743 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	MRPL19	P53875	158 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	TIM10	P87108	93 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	YDR278C	Q05612	105 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	RPL19A	P0CX82	189 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	RPL19B	P0CX83	189 aa	Predicted RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	TCP1	P12612	559 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	PPH22	P23595	377 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	PRE7	P23724	241 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	GCD11	P32481	527 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	YBR259W	P38338	688 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	DHH1	P39517	506 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	YER130C	P39959	443 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	CUE3	P53137	624 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	YGR127W	P53275	312 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	YNR065C	P53751	1116 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	YCL001W-A	P87012	153 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	ATP14	Q12349	124 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	RPL24A	P04449	155 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	MSF1	P08425	469 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	SLY41	P22215	453 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	SPO11	P23179	398 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	RPS5	P26783	225 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	SOF1	P33750	489 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	ERV15	P38312	142 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	YEL025C	P39991	1188 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	DPH1	P40487	425 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	YGL108C	P53139	140 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	RNY1	Q02933	434 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	ARG7	Q04728	441 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	UTP21	Q06078	939 aa	Predicted RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	LYS21	Q12122	440 aa	Known RBP	4.36	□□□□□ -1.71
GDE1	YPL110C	ISA2	Q12425	185 aa		4.36	□□□□□ -1.71
GDE1	YPL110C	TOP3	P13099	656 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	MTF1	P14908	341 aa	Known RBP	4.35	□□□□□ -1.71
GDE1	YPL110C	GEX1	P25596	615 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	SAC1	P32368	623 aa	Known RBP	4.35	□□□□□ -1.71
GDE1	YPL110C	PPS1	P38148	807 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	YHL008C	P38750	627 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	DUN1	P39009	513 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	LTP1	P40347	161 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	SNG1	P46950	547 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	YJL043W	P47053	257 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	SEG1	Q04279	960 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	CRT10	Q08226	957 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	HXK2	P04807	486 aa	Known RBP	4.35	□□□□□ -1.71
GDE1	YPL110C	SSA3	P09435	649 aa	Known RBP	4.35	□□□□□ -1.71
GDE1	YPL110C	SAM1	P10659	382 aa	Known RBP	4.35	□□□□□ -1.71
GDE1	YPL110C	HEM15	P16622	393 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	MLS1	P30952	554 aa		4.35	□□□□□ -1.71
GDE1	YPL110C	COQ2	P32378	372 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms