RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A VPS74Q06385 345 aa3.17□□□□□ -1.9
YDR170W-AYDR170W-A KEL3Q08979 651 aaPredicted RBP3.17□□□□□ -1.9
YDR170W-AYDR170W-A ISA2Q12425 185 aa3.17□□□□□ -1.9
YDR170W-AYDR170W-A ISN1Q99312 450 aa3.17□□□□□ -1.9
YDR170W-AYDR170W-A RHO2P06781 192 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A SPS4P09937 338 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A CLB1P24868 471 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A URA7P28274 579 aaKnown RBP3.16□□□□□ -1.9
YDR170W-AYDR170W-A RML2P32611 393 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A THI2P38141 450 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A RPH1P39956 796 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A SHO1P40073 367 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A RPR2P40571 144 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A YFR016CP43597 1233 aaKnown RBP3.16□□□□□ -1.9
YDR170W-AYDR170W-A KAP120Q02932 1032 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A SOV1Q04748 898 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A ROY1Q04847 553 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A ERP1Q05359 219 aaKnown RBP3.16□□□□□ -1.9
YDR170W-AYDR170W-A AYT1Q12226 474 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A SET6Q12529 373 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A YMR230W-AQ3E7B5 62 aa3.16□□□□□ -1.9
YDR170W-AYDR170W-A GPH1P06738 902 aaKnown RBP3.15□□□□□ -1.91
YDR170W-AYDR170W-A ATP10P18496 279 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A BUB3P26449 341 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A YME2P32843 850 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A PIM1P36775 1133 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A CBP4P37267 147 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A MDM31P38880 579 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A HAT2P39984 401 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A FAU1P40099 211 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A ELP2P42935 788 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A URB2P47108 1174 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A FMS1P50264 508 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A VPS9P54787 451 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A CIK1Q01649 594 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A SCW10Q04951 389 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A DON1Q05610 365 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
YDR170W-AYDR170W-A RRD2Q12461 358 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A AFI1Q99222 893 aa3.15□□□□□ -1.91
YDR170W-AYDR170W-A CYB2P00175 591 aa3.14□□□□□ -1.91
YDR170W-AYDR170W-A LEU4P06208 619 aaKnown RBP3.14□□□□□ -1.91
YDR170W-AYDR170W-A RPL20AP0CX23 172 aaKnown RBP3.14□□□□□ -1.91
YDR170W-AYDR170W-A RPL20BP0CX24 172 aaPredicted RBP3.14□□□□□ -1.91
YDR170W-AYDR170W-A YIM1P28625 365 aa3.14□□□□□ -1.91
YDR170W-AYDR170W-A GYP6P32806 458 aa3.14□□□□□ -1.91
YDR170W-AYDR170W-A LOS1P33418 1100 aaPredicted RBP3.14□□□□□ -1.91
YDR170W-AYDR170W-A LRP1P38801 184 aaKnown RBP3.14□□□□□ -1.91
YDR170W-AYDR170W-A ALG8P40351 577 aa3.14□□□□□ -1.91
YDR170W-AYDR170W-A GWT1P47026 490 aa3.14□□□□□ -1.91
YDR170W-AYDR170W-A RMD9P53140 646 aaKnown RBP3.14□□□□□ -1.91
YDR170W-AYDR170W-A OGG1P53397 376 aaPredicted RBP3.14□□□□□ -1.91
YDR170W-AYDR170W-A KTR5P53966 522 aaPredicted RBP3.14□□□□□ -1.91
YDR170W-AYDR170W-A SKO1Q02100 647 aa3.14□□□□□ -1.91
YDR170W-AYDR170W-A AIM32Q04689 311 aa3.14□□□□□ -1.91
YDR170W-AYDR170W-A RRP45Q05636 305 aaKnown RBP3.14□□□□□ -1.91
YDR170W-AYDR170W-A SIL1Q08199 421 aa3.14□□□□□ -1.91
YDR170W-AYDR170W-A SNU66Q12420 587 aaPredicted RBP3.14□□□□□ -1.91
YDR170W-AYDR170W-A HSP82P02829 709 aaKnown RBP3.13□□□□□ -1.91
YDR170W-AYDR170W-A GDH1P07262 454 aaKnown RBP3.13□□□□□ -1.91
YDR170W-AYDR170W-A MDH1P17505 334 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
YDR170W-AYDR170W-A MCK1P21965 375 aaKnown RBP3.13□□□□□ -1.91
YDR170W-AYDR170W-A CPR2P23285 205 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A TFB1P32776 642 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A FRE2P36033 711 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A RSM22P36056 628 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A PMU1P36069 295 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A NTC20P38302 140 aaPredicted RBP3.13□□□□□ -1.91
YDR170W-AYDR170W-A YJL213WP40896 331 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A ZIM17P42844 174 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A CAK1P43568 368 aaPredicted RBP3.13□□□□□ -1.91
YDR170W-AYDR170W-A COS5P47187 383 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A TCB2P48231 1178 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A YDL186WP48568 277 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A COS10P52924 374 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A YGL138CP53122 345 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A SXM1Q04175 944 aaKnown RBP3.13□□□□□ -1.91
YDR170W-AYDR170W-A COS7Q07788 383 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A PPT2Q12036 173 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A YBR298C-AQ8TGK4 73 aa3.13□□□□□ -1.91
YDR170W-AYDR170W-A HEM2P05373 342 aa3.12□□□□□ -1.91
YDR170W-AYDR170W-A PHO2P07269 559 aa3.12□□□□□ -1.91
YDR170W-AYDR170W-A ATR1P13090 542 aa3.12□□□□□ -1.91
YDR170W-AYDR170W-A ERV1P27882 189 aa3.12□□□□□ -1.91
YDR170W-AYDR170W-A BLI1P35727 113 aa3.12□□□□□ -1.91
YDR170W-AYDR170W-A APE3P37302 537 aaKnown RBP3.12□□□□□ -1.91
YDR170W-AYDR170W-A ISC1P40015 477 aaKnown RBP3.12□□□□□ -1.91
YDR170W-AYDR170W-A TFG2P41896 400 aaPredicted RBP3.12□□□□□ -1.91
YDR170W-AYDR170W-A BUD27P43573 796 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
YDR170W-AYDR170W-A ART5P53244 586 aaKnown RBP3.12□□□□□ -1.91
YDR170W-AYDR170W-A RIP1P08067 215 aa3.11□□□□□ -1.91
YDR170W-AYDR170W-A CDC60P26637 1090 aaKnown RBP3.11□□□□□ -1.91
YDR170W-AYDR170W-A AGA1P32323 725 aa3.11□□□□□ -1.91
YDR170W-AYDR170W-A REC114P32841 428 aa3.11□□□□□ -1.91
YDR170W-AYDR170W-A NIP100P33420 868 aa3.11□□□□□ -1.91
YDR170W-AYDR170W-A ARA1P38115 344 aa3.11□□□□□ -1.91
YDR170W-AYDR170W-A VHC1P38329 1120 aa3.11□□□□□ -1.91
YDR170W-AYDR170W-A RRT2P38332 387 aa3.11□□□□□ -1.91
YDR170W-AYDR170W-A KRE9P39005 276 aa3.11□□□□□ -1.91
YDR170W-AYDR170W-A NCS2P53923 493 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms