RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 VSIG10LQ86VR7 867 aa17.33■□□□□ 0.36
PHGDH-231ENST00000641939 SMARCC2Q8TAQ2 1214 aa17.33■□□□□ 0.36
PHGDH-231ENST00000641939 BRF1Q92994 677 aa17.33■□□□□ 0.36
PHGDH-231ENST00000641939 CUL5Q93034 780 aa17.33■□□□□ 0.36
PHGDH-231ENST00000641939 TRIM43Q96BQ3 446 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-231ENST00000641939 UBE2OQ9C0C9 1292 aaKnown RBP17.33■□□□□ 0.36
PHGDH-231ENST00000641939 FRMPD4Q14CM0 1322 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 PIK3CDO00329 1044 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 GH1P01241 217 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 METAP2P50579 478 aaKnown RBP eCLIP17.32■□□□□ 0.36
PHGDH-231ENST00000641939 FAAP100Q0VG06 881 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 FUT2Q10981 343 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 USP17L6PQ6QN14 398 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 HEATR3Q7Z4Q2 680 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 SLC43A3Q8NBI5 491 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 IL31RAQ8NI17 732 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 SEZ6LQ9BYH1 1024 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 AGXT2Q9BYV1 514 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 PSTPIP2Q9H939 334 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 FAM217BQ9NTX9 383 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-231ENST00000641939 TMEM39AQ9NV64 488 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 DDX41Q9UJV9 622 aaKnown RBP17.32■□□□□ 0.36
PHGDH-231ENST00000641939 MRVI1Q9Y6F6 885 aa17.32■□□□□ 0.36
PHGDH-231ENST00000641939 CCDC196A0A1B0GTZ2 297 aa17.31■□□□□ 0.36
PHGDH-231ENST00000641939 A6NJR5 290 aa17.31■□□□□ 0.36
PHGDH-231ENST00000641939 MEIS2O14770 477 aa17.31■□□□□ 0.36
PHGDH-231ENST00000641939 KIAA0355O15063 1070 aa17.31■□□□□ 0.36
PHGDH-231ENST00000641939 MYL3P08590 195 aa17.31■□□□□ 0.36
PHGDH-231ENST00000641939 CDC27P30260 824 aa17.31■□□□□ 0.36
PHGDH-231ENST00000641939 FXR1P51114 621 aaKnown RBP eCLIP17.31■□□□□ 0.36
PHGDH-231ENST00000641939 PURAQ00577 322 aaKnown RBP17.31■□□□□ 0.36
PHGDH-231ENST00000641939 ITGA7Q13683 1181 aa17.31■□□□□ 0.36
PHGDH-231ENST00000641939 RUFY3Q7L099 469 aa17.31■□□□□ 0.36
PHGDH-231ENST00000641939 ZSWIM6Q9HCJ5 1215 aa17.31■□□□□ 0.36
PHGDH-231ENST00000641939 NID2Q14112 1375 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 GRIN2DO15399 1336 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 TLR3O15455 904 aaKnown RBP17.3■□□□□ 0.36
PHGDH-231ENST00000641939 KPNA6O60684 536 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 RGS20O76081 388 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 RAG1P15918 1043 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 PSMC6P62333 389 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 ARHGAP1Q07960 439 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 KCNV1Q6PIU1 500 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 FAM126BQ8IXS8 530 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 TDHQ8IZJ6 230 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 GPKOWQ92917 476 aaPredicted RBP eCLIP17.3■□□□□ 0.36
PHGDH-231ENST00000641939 MTG1Q9BT17 334 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-231ENST00000641939 TM6SF1Q9BZW5 370 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
PHGDH-231ENST00000641939 V9GY48 417 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-231ENST00000641939 DOCK5Q9H7D0 1870 aa17.29■□□□□ 0.36
PHGDH-231ENST00000641939 STAM2O75886 525 aa17.29■□□□□ 0.36
PHGDH-231ENST00000641939 TGFB3P10600 412 aa17.29■□□□□ 0.36
PHGDH-231ENST00000641939 ITGB8P26012 769 aa17.29■□□□□ 0.36
PHGDH-231ENST00000641939 ADD1P35611 737 aaKnown RBP17.29■□□□□ 0.36
PHGDH-231ENST00000641939 WWC2Q6AWC2 1192 aa17.29■□□□□ 0.36
PHGDH-231ENST00000641939 AFG1LQ8WV93 481 aa17.29■□□□□ 0.36
PHGDH-231ENST00000641939 BADQ92934 168 aa17.29■□□□□ 0.36
PHGDH-231ENST00000641939 EMID1Q96A84 441 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-231ENST00000641939 TBX21Q9UL17 535 aa17.29■□□□□ 0.36
PHGDH-231ENST00000641939 hCG_1984214I3L0E3 225 aa17.28■□□□□ 0.36
PHGDH-231ENST00000641939 CD4P01730 458 aa17.28■□□□□ 0.36
PHGDH-231ENST00000641939 NAPAP54920 295 aa17.28■□□□□ 0.36
PHGDH-231ENST00000641939 EVCP57679 992 aa17.28■□□□□ 0.36
PHGDH-231ENST00000641939 MRPS9P82933 396 aaKnown RBP17.28■□□□□ 0.36
PHGDH-231ENST00000641939 LAMC2Q13753 1193 aa17.28■□□□□ 0.36
PHGDH-231ENST00000641939 UBE2SQ16763 222 aa17.28■□□□□ 0.36
PHGDH-231ENST00000641939 GNPTABQ3T906 1256 aa17.28■□□□□ 0.36
PHGDH-231ENST00000641939 PPP1R18Q6NYC8 613 aa17.28■□□□□ 0.36
PHGDH-231ENST00000641939 XRRA1Q6P2D8 792 aa17.28■□□□□ 0.36
PHGDH-231ENST00000641939 ZNF713Q8N859 430 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-231ENST00000641939 ZFP91Q96JP5 570 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-231ENST00000641939 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.36
PHGDH-231ENST00000641939 MMP3P08254 477 aa17.27■□□□□ 0.36
PHGDH-231ENST00000641939 TOB2Q14106 344 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-231ENST00000641939 PCNX4Q63HM2 1172 aa17.27■□□□□ 0.36
PHGDH-231ENST00000641939 TEX2Q8IWB9 1127 aa17.27■□□□□ 0.36
PHGDH-231ENST00000641939 DHX37Q8IY37 1157 aaKnown RBP17.27■□□□□ 0.36
PHGDH-231ENST00000641939 PPTC7Q8NI37 304 aa17.27■□□□□ 0.36
PHGDH-231ENST00000641939 INPP4AQ96PE3 977 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-231ENST00000641939 UPF3BQ9BZI7 483 aaKnown RBP17.27■□□□□ 0.36
PHGDH-231ENST00000641939 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
PHGDH-231ENST00000641939 STXBP3O00186 592 aa17.26■□□□□ 0.35
PHGDH-231ENST00000641939 TIMP1P01033 207 aa17.26■□□□□ 0.35
PHGDH-231ENST00000641939 PDIA3P30101 505 aaKnown RBP17.26■□□□□ 0.35
PHGDH-231ENST00000641939 ICAM3P32942 547 aa17.26■□□□□ 0.35
PHGDH-231ENST00000641939 DGKDQ16760 1214 aa17.26■□□□□ 0.35
PHGDH-231ENST00000641939 NBPF20Q3BBV1 942 aa17.26■□□□□ 0.35
PHGDH-231ENST00000641939 CELF3Q5SZQ8 465 aaKnown RBP17.26■□□□□ 0.35
PHGDH-231ENST00000641939 MYSM1Q5VVJ2 828 aa17.26■□□□□ 0.35
PHGDH-231ENST00000641939 TYW1BQ6NUM6 668 aa17.26■□□□□ 0.35
PHGDH-231ENST00000641939 ALDH8A1Q9H2A2 487 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-231ENST00000641939 RIC8AQ9NPQ8 531 aa17.26■□□□□ 0.35
PHGDH-231ENST00000641939 BARHL2Q9NY43 387 aa17.26■□□□□ 0.35
PHGDH-231ENST00000641939 LAMA2P24043 3122 aaKnown RBP17.25■□□□□ 0.35
PHGDH-231ENST00000641939 GGPS1O95749 300 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 UBA1P22314 1058 aaKnown RBP17.25■□□□□ 0.35
PHGDH-231ENST00000641939 ADCY7P51828 1080 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 ANAPC15P60006 121 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 SP2Q02086 613 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms