RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 BIN1O00499 593 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 MAFGO15525 162 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 RHOBTB3O94955 611 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 RPN1P04843 607 aaKnown RBP10.91□□□□□ -0.66
PHGDH-215ENST00000641371 PLCG1P19174 1290 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 AFMP43652 599 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 PLCB2Q00722 1185 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 SPAG1Q07617 926 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 PSMD2Q13200 908 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 PPIL2Q13356 520 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 VGLL4Q14135 290 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 TMEM119Q4V9L6 283 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 CEP55Q53EZ4 464 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 PRR16Q569H4 304 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 FASTKD5Q7L8L6 764 aaKnown RBP10.91□□□□□ -0.66
PHGDH-215ENST00000641371 PLA2G4DQ86XP0 818 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 CHST13Q8NET6 341 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 LARP4BQ92615 738 aaKnown RBP10.91□□□□□ -0.66
PHGDH-215ENST00000641371 HAS1Q92839 578 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 CDCA5Q96FF9 252 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 TAF1DQ9H5J8 278 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-215ENST00000641371 TCEAL9Q9UHQ7 104 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 SNCAIPQ9Y6H5 919 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 RLFQ13129 1914 aa10.91□□□□□ -0.66
PHGDH-215ENST00000641371 SPDYE5A6NIY4 337 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 B4DLN1 442 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 EDIL3O43854 480 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 KIF20AO95235 890 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 PRR29P0C7W0 189 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 ALAS1P13196 640 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 RPA1P27694 616 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 ZNF75DP51815 510 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 HMGCS2P54868 508 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 SNAP25P60880 206 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 NAALADL2Q58DX5 795 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 PCNX4Q63HM2 1172 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 FOXR2Q6PJQ5 311 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 LBX2Q6XYB7 198 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-215ENST00000641371 CCDC84Q86UT8 332 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-215ENST00000641371 FCHSD1Q86WN1 690 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 ANKRD20A12PQ8NF67 263 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 NOC3LQ8WTT2 800 aaKnown RBP10.9□□□□□ -0.66
PHGDH-215ENST00000641371 CLEC4DQ8WXI8 215 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 RAD54LQ92698 747 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 CTAGE1Q96RT6 745 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 RIT2Q99578 217 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 POLR3CQ9BUI4 534 aaPredicted RBP10.9□□□□□ -0.66
PHGDH-215ENST00000641371 TRIM9Q9C026 710 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 TUFT1Q9NNX1 390 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 EXOC1Q9NV70 894 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 IMPACTQ9P2X3 320 aa10.9□□□□□ -0.66
PHGDH-215ENST00000641371 A0A0G2JLL6 359 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 BICDL2A1A5D9 508 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 MEIS1O00470 390 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 PSMA7O14818 248 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 NRDCO43847 1150 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 HOXA13P31271 388 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 CCT6AP40227 531 aaKnown RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 GSDMDP57764 484 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 GRB10Q13322 594 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 PPP2R5CQ13362 524 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 SPATA1Q5VX52 437 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 RNF207Q6ZRF8 634 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 UNC13DQ70J99 1090 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 PRRT2Q7Z6L0 340 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 ZSCAN30Q86W11 494 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 CPXCR1Q8N123 301 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 REPS2Q8NFH8 660 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 SLC5A5Q92911 643 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 LENG9Q96B70 501 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 ATG4CQ96DT6 458 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 DHTKD1Q96HY7 919 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 CDHR1Q96JP9 859 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 AGBL1Q96MI9 1066 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 MPHOSPH6Q99547 160 aaKnown RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 MXRA8Q9BRK3 442 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 MMTAG2Q9BU76 263 aaKnown RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 ACAD9Q9H845 621 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 RAVER2Q9HCJ3 691 aaKnown RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 RNF146Q9NTX7 359 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 RWDD2AQ9UIY3 292 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 SCAF8Q9UPN6 1271 aaKnown RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 KCNH4Q9UQ05 1017 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 A0A0G2JMZ2 1700 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 SMCHD1A6NHR9 2005 aa10.89□□□□□ -0.67
PHGDH-215ENST00000641371 GOLGB1Q14789 3259 aaKnown RBP10.89□□□□□ -0.67
PHGDH-215ENST00000641371 COL11A1P12107 1806 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 PFASO15067 1338 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 SYNRGQ9UMZ2 1314 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 IGLV3-22A0A075B6J6 115 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 LOC102724159A0A0B4J2E5 919 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 DCAF8L1A6NGE4 600 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 POTEMA6NI47 508 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 ADM5C9JUS6 153 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 FAM86B1E9PN63 330 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 IRF6O14896 467 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 FOXN1O15353 648 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms